| Protein: | gi|9758749, gi|2... |
| Organism: | Arabidopsis thaliana |
| Length: | 973 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9758749, gi|2....
| Description | E-value | Query Range |
Subject Range |
|
|
357.0 | [0..40] | [973..4] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MKGIEEEASL VGLTIRTSSP ASSSSKKGKE DLLQANNNAS DSSPSIKNSP FYSPSLVSPP 60
61 SSAFVSALQS PYISPRATTP SITTHKPSPP LSYKGSQSDD VPSSSYTPPS DQYEFSDEQP 120
121 SDRKLKLSAS CTPDPAPPRI SFSFPVPRVS LAKVSVSSPA TN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [163-296] |
1 11 21 31 41 51
| | | | | |
1 TKLRSSDVFI GFHGQNPNLV RFCKWLKSEL ELQGIACFVA DRAKYSDTQS HEIADRVICS 60
61 VTYGIVVVSC SSLLNYLSLE EVRFFAQKKN LIPIFYGTGP SEIMGLLNCN AIDKECKEAI 120
121 DGLIKSHEFK LEAN
|
| Detection Method: | |
| Confidence: | 2.36 |
| Match: | 1fyvA |
| Description: | Toll-like receptor 1, TLR1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.166909062418251 | bayes_pls_golite062009 |
|
Region A: Residues: [297-831] |
1 11 21 31 41 51
| | | | | |
1 ESNWRSCVGK TATILRAKLG RKSVADKEIV EGIDELPFPR NRSFLGREKE IIEMEMALFG 60
61 NGEYLESTTP STRGEASGQS EGLADEESDV VPTRNGKFIS LELGRCSDSR SEAWSDPNGG 120
121 KNSLKRLLKT KKCRNNSNCK SSTSVVCVNG VPGIGKTELA LEFAYRYSQR YKMVLWVGGE 180
181 ARYFRQNLLN LSFSLGLDVS ADAEKDRGRL RSFDEQEFEA FKRIKRELFR DMPYLLIIDN 240
241 LEIEKDWWEG KDLNDLIPRN TGGTHVLITT RLPKVMTFDT VQLSILPSSD AMVLLRGRRK 300
301 KDYPVEEVEV LKLFDEKLGR LSYGLWVVGS LLSELAILPS ALFEAVNKVQ IEERSASPFL 360
361 NLNDEQYCKS NPFVAKVLAF SLAVLEQAEG NRNLLSLKML LVGAWFAPVP IPVNLLAAAA 420
421 KNMPTGGNRF SKWNKCLSHT FAWCGGCGLG RRSEEDAAFL LVRLGLARLT NRQPGCWIQF 480
481 HPITQTFARR RDYILAPKAT VQGVRKIDNP LLNLDHLWAS AFLVFGFKSE PPLVQ
|
| Detection Method: | |
| Confidence: | 14.39794 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [832-973] |
1 11 21 31 41 51
| | | | | |
1 LQAMDMVLYI KRTALPLAIT AFTTFSRCNS ALELLKVCTN VLEEVEKSFV SQIQDWRQGS 60
61 LCWKKKTNKK VDEYVWQDVT LLKALLLETR AKLLLRGGHF DSGEELCRTC ISIRTVMLGH 120
121 NHDLTLAAQE TLAKLVRMRS KI
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
