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Protein Overview: VSR5_ARATH

General Information:
Name(s) found: VSR5_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T00476 probable vacuolar sorting receptor [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|71153405|sp|O64758.1|VSR5_ARATH RecName: Full=Vacuolar-sorting receptor 5; Short=AtVSR5; AltName: Full=Epidermal growth factor receptor-like protein 5; Short=AtELP5; AltName: Full=BP80-like protein e; Short=AtBP80e; Flags: Precursor [NCBI NR]
  • gi|3033390|gb|AAC12834.1| putative vacuolar sorting receptor [Arabidopsis thaliana] [NCBI NR]
  • gi|28416561|gb|AAO42811.1| At2g34940 [Arabidopsis thaliana] [NCBI NR]
  • gi|15226864|ref|NP_181040.1| vacuolar sorting receptor, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|110743468|dbj|BAE99620.1| putative vacuolar sorting receptor [Arabidopsis thaliana] [NCBI NR]
  • Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana GN=VSR5 PE=2 SV=1 [Swiss-Prot]
  • (O64758) Putative vacuolar sorting receptor (At2g34940) [athaliana3702.FASTAC.txt]
  • At2g34940 [Arabidopsis thaliana]gi|3033390|gb|AAC12834.1| putative vacuolar sorting receptor [Arabidopsis thaliana]gi|7488421|pir||T00476 probable vacuolar sorting receptor [imported] - Arabidopsis thalianagi|15226864|ref|NP_181040.1| vacuolar sorting [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Vacuolar sorting receptor 5 precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | vacuolar sorting receptor, putative | chr2:14747576-14750393 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At2g34940 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Vacuolar sorting receptor 5 precursor (AtVSR5) (Epidermal growth factor receptor-like protein 5) (AtELP5) (BP80-like protein e) (AtBP80e) [nr-271106-contam.fasta]
  • putative vacuolar sorting receptor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • calcium ion binding / peptidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: VSR5, VSR3;2, BP80-3;2 | VACUOLAR SORTING RECEPTOR 5 | chr2:14740497-14743314 FORWARD LENGTH=618 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 618 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [ISS]
    Golgi transport complex [IPI]
    Biological Process: protein targeting to vacuole [ISS][TAS]
    Molecular Function: calcium ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPSNKGTVL ALILALTMVV VNGFSSRFFV EKSSLTVLNS WEMGAKHDAA IANFGLPKYG  60
   61 GFMIGSVVYA GQDAYGCNSF NKTFNTKSPY PKILLIDRGV CNFALKIWNG QQSGAAAVLL 120
  121 ADNIVEPLIT MDTPQDEDPD FIDKVKIPSA LILRSFGDSL KKALKRGEEV ILKMDWSESI 180
  181 PNPDERVEYE LWANTNDECG VHCDKQIDFI KNFKGMAQIL EKGGYTLFRP HYISWVCPKE 240
  241 LLLSKQCRTQ CINQGRYCAL DTKQEFEDGY NGKDVVYENL RQLCVHKVAK EKNTSWVWWD 300
  301 YVTDFNIRCS MKEKKYSREC AETIVESLGL SLEKIKKCIG DPDADVENEV LKAEEAFQLG 360
  361 QENRGIVTIF PTLMINNAQY RGKLERTAVL KAICSGFKER TEPSICLNSD IETNECLIEN 420
  421 GGCWQDKRSN VTACKDTFRG RVCECPVVDG VQYKGDGYTS CKPYGPARCS MNNGDCWSET 480
  481 RKGLTFSSCS DSETSGCRCP LGFLGDGLKC EDIDECKEKS ACKCDGCKCK NNWGGYECKC 540
  541 SNNSIYMKEE DTCIERRSGS RSRGLFTIVV LTAIAGISLG AYIFYKYHLQ SYMDSEIVSI 600
  601 MSQYIPLDSQ SINQDSFK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] FFAS03 2.15 No description for 2ootA was found.
    2 View Details [186..618] PSI-BLAST 23.221849 Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.286076792172079 bayes_pls_golite062009
  • protein binding
    		•  0.14494900666454 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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