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Protein Overview: PP190_ARATH

General Information:
Name(s) found: PP190_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 757 amino acids

    Gene Ontology:
    Cellular Component: chloroplast thylakoid membrane [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFISRSKRY QSKARVYLSL PRSSNSSLFS LPRLFSTIEE TQTPANANPE TQSPDAKSET  60
   61 KKNLTSTETR PLRERFQRGK RQNHEKLEDT ICRMMDNRAW TTRLQNSIRD LVPEWDHSLV 120
  121 YNVLHGAKKL EHALQFFRWT ERSGLIRHDR DTHMKMIKML GEVSKLNHAR CILLDMPEKG 180
  181 VPWDEDMFVV LIESYGKAGI VQESVKIFQK MKDLGVERTI KSYNSLFKVI LRRGRYMMAK 240
  241 RYFNKMVSEG VEPTRHTYNL MLWGFFLSLR LETALRFFED MKTRGISPDD ATFNTMINGF 300
  301 CRFKKMDEAE KLFVEMKGNK IGPSVVSYTT MIKGYLAVDR VDDGLRIFEE MRSSGIEPNA 360
  361 TTYSTLLPGL CDAGKMVEAK NILKNMMAKH IAPKDNSIFL KLLVSQSKAG DMAAATEVLK 420
  421 AMATLNVPAE AGHYGVLIEN QCKASAYNRA IKLLDTLIEK EIILRHQDTL EMEPSAYNPI 480
  481 IEYLCNNGQT AKAEVLFRQL MKRGVQDQDA LNNLIRGHAK EGNPDSSYEI LKIMSRRGVP 540
  541 RESNAYELLI KSYMSKGEPG DAKTALDSMV EDGHVPDSSL FRSVIESLFE DGRVQTASRV 600
  601 MMIMIDKNVG IEDNMDLIAK ILEALLMRGH VEEALGRIDL LNQNGHTADL DSLLSVLSEK 660
  661 GKTIAALKLL DFGLERDLSL EFSSYDKVLD ALLGAGKTLN AYSVLCKIME KGSSTDWKSS 720
  721 DELIKSLNQE GNTKQADVLS RMIKKGQGIK KQNNVSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..97] deduced N/A No confident structure predictions are available.
    2 View Details [98..180] PSI-BLAST 3.39794 Crystal structure of E.coli TPR-protein NlpI
    3 View Details [181..679] PSI-BLAST 20.522879 No description for 2gw1A was found.
    4 View Details [680..757] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle