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Protein Overview: PUB7_ARATH

General Information:
Name(s) found: PUB7_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75262278|sp|Q9CAG5.1|PUB7_ARATH RecName: Full=U-box domain-containing protein 7; AltName: Full=Plant U-box protein 7 [NCBI NR]
  • gi|30102748|gb|AAP21292.1| At1g67530 [Arabidopsis thaliana] [NCBI NR]
  • gi|26449494|dbj|BAC41873.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • pir||G96698 hypothetical protein F12B7.8 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|238478994|ref|NP_001154455.1| armadillo/beta-catenin repeat family protein / U-box domain-containing family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15220457|ref|NP_176920.1| armadillo/beta-catenin repeat family protein / U-box domain-containing family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12324681|gb|AAG52304.1|AC011020_11 hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7 PE=2 SV=1 [Swiss-Prot]
  • (Q9CAG5) Hypothetical protein (At1g67530) [athaliana3702.FASTAC.txt]
  • At1g67530 [Arabidopsis thaliana]gi|26449494|dbj|BAC41873.1| unknown protein [Arabidopsis thaliana]gi|25404676|pir||G96698 hypothetical protein F12B7.8 [imported] - Arabidopsis thalianagi|12324681|gb|AAG52304.1| hypothetical protein [Arabidopsis thalian [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Armadillo/beta-catenin repeat family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | armadillo/beta-catenin repeat family protein / U-box domain-containing family protein | chr1:25311892-25314744 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ubiquitin-protein ligase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g67530 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | ARM repeat superfamily protein | chr1:25308229-25311081 FORWARD LENGTH=782 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 782 amino acids

    Gene Ontology:
    Cellular Component: ubiquitin ligase complex [IEA]
    Biological Process: protein ubiquitination [IEA]
    Molecular Function: ubiquitin-protein ligase activity [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVTELEENL FAASDAKLHG DMCKELSGVL CKVLSIFPSL EGARPRSKSG IQALCSLHIA  60
   61 LEKAKNILQH CSECSKLYLA ITGDAVLLKF EKAKIALIDG LKRVEDIVPS SIGSQILEIV 120
  121 GELENTRFML DPSEKEVGDQ IIALLQQGKK FDNCNDNTEL EIFHRAATRL SITSSRVALA 180
  181 ERRALKKLID RARAEEDKRK ESIVAYLLHL MRKCSKLFRS EILDENDSPG SYPCSPNEDH 240
  241 GSVHGFGRQL SRFGSLNDKP MNSINSGQMP VPPEELRCPI SLQLMCDPVI IASGQTYERV 300
  301 CIEKWFSDGH NTCPKTQQQL PHISLTPNNC VKGLIASWCE QNGTQIPSGP PESQDLDYWR 360
  361 LALSDSESTK SQSVNSIGSY KLKGVKIVPL EENGTTVVER QNTEESFVSD DDDEEDSDIN 420
  421 VLERYQDLLA VLNEEEGLEK KCKVVEKIRL LLKDDEEARI FMGANGFVEA LLRFLGSAVD 480
  481 DNNAAAQDSG AMALFNLAVN NNRNKELMLT SGVIRLLEKM ISSAESHGSA TALYLNLSCL 540
  541 DEAKSVIGSS QAVPFLVQLL QKEIETQCKL DALHALYNLS TYSPNIPALL SSNIIKSLQG 600
  601 LLASTGENLW IEKSLAVLLN LASSQEGKDE AVSSQGMISS LATVLDMGDT TEQEQAVSCL 660
  661 LILCNGRESC IQMVLQEGVI PSLVSISVNG TPRGREKSQK LLMLFREERQ QRDQPSSNRD 720
  721 EPPQKEPARK SLSAPLSVHG STPASASVQD YEPRVLSKSM SRRKSMARPF SFFWKKSYSV 780
  781 RE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..268] PSI-BLAST 3.39794 Heavy meromyosin subfragment
    2 View Details [269..348] PSI-BLAST 11.39794 NMR solution structure of the U box domain from AtPUB14, an armadillo repeat containing protein from Arabidopsis thaliana
    3 View Details [349..782] PSI-BLAST 55.522879 Importin alpha


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle