| Protein: | PUB7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 782 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
403.0 | [0..1] | [780..1] |
|
Region A: Residues: [1-268] |
1 11 21 31 41 51
| | | | | |
1 MDVTELEENL FAASDAKLHG DMCKELSGVL CKVLSIFPSL EGARPRSKSG IQALCSLHIA 60
61 LEKAKNILQH CSECSKLYLA ITGDAVLLKF EKAKIALIDG LKRVEDIVPS SIGSQILEIV 120
121 GELENTRFML DPSEKEVGDQ IIALLQQGKK FDNCNDNTEL EIFHRAATRL SITSSRVALA 180
181 ERRALKKLID RARAEEDKRK ESIVAYLLHL MRKCSKLFRS EILDENDSPG SYPCSPNEDH 240
241 GSVHGFGRQL SRFGSLNDKP MNSINSGQ
|
| Detection Method: |  |
| Confidence: | 3.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [269-348] |
1 11 21 31 41 51
| | | | | |
1 MPVPPEELRC PISLQLMCDP VIIASGQTYE RVCIEKWFSD GHNTCPKTQQ QLPHISLTPN 60
61 NCVKGLIASW CEQNGTQIPS
|
| Detection Method: | |
| Confidence: | 11.39794 |
| Match: | 1t1hA |
| Description: | NMR solution structure of the U box domain from AtPUB14, an armadillo repeat containing protein from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [349-782] |
1 11 21 31 41 51
| | | | | |
1 GPPESQDLDY WRLALSDSES TKSQSVNSIG SYKLKGVKIV PLEENGTTVV ERQNTEESFV 60
61 SDDDDEEDSD INVLERYQDL LAVLNEEEGL EKKCKVVEKI RLLLKDDEEA RIFMGANGFV 120
121 EALLRFLGSA VDDNNAAAQD SGAMALFNLA VNNNRNKELM LTSGVIRLLE KMISSAESHG 180
181 SATALYLNLS CLDEAKSVIG SSQAVPFLVQ LLQKEIETQC KLDALHALYN LSTYSPNIPA 240
241 LLSSNIIKSL QGLLASTGEN LWIEKSLAVL LNLASSQEGK DEAVSSQGMI SSLATVLDMG 300
301 DTTEQEQAVS CLLILCNGRE SCIQMVLQEG VIPSLVSISV NGTPRGREKS QKLLMLFREE 360
361 RQQRDQPSSN RDEPPQKEPA RKSLSAPLSV HGSTPASASV QDYEPRVLSK SMSRRKSMAR 420
421 PFSFFWKKSY SVRE
|
| Detection Method: | |
| Confidence: | 55.522879 |
| Match: | 1ialA |
| Description: | Importin alpha |
Matching Structure (courtesy of the PDB): |
|
