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Protein Overview: gi|29294056, gi|...

General Information:
Name(s) found: gi|29294056 [NCBI NR]
gi|22531217 [NCBI NR]
gi|22326942 [NCBI NR]
gi|13374856 [NCBI NR]
gi|110742391 [NCBI NR]
Description(s) found:
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  • gi|29294056|gb|AAO73893.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22531217|gb|AAM97112.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22326942|ref|NP_680185.1| ubiquitin thiolesterase [Arabidopsis thaliana] [NCBI NR]
  • gi|13374856|emb|CAC34490.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110742391|dbj|BAE99118.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9C590) Hypothetical protein (Expressed protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|29294056|gb|AAO73893.1| expressed protein [Arabidopsis thaliana]gi|13374856|emb|CAC34490.1| putative protein [Arabidopsis thaliana]gi|22326942|ref|NP_680185.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein, supported by full-length cDNA gi:22531216 from (Arabidopsis thaliana) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01037.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43911.1); contains InterPro domain Protein of unknown function DUF860, plant (InterPro:IPR008578) | chr5:7262074 [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • expressed protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01037.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43911.1); contains InterPro domain Protein of unknown function DUF860, plant (InterPro:IPR008578) | chr5:7262074-7263423 FORWARD [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: | Ubiquitin carboxyl-terminal hydrolase family protein | chr5:7262071-7263420 FORWARD LENGTH=449 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Expressed protein OS=Arabidopsis thaliana GN=At5g21970 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 449 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: ubiquitin-dependent protein catabolic process [IEA]
    Molecular Function: ubiquitin thiolesterase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGLRCWLQF YRNGNAHNVF AIMPERNVLY GESSFRRVWV RFMTSSKRVQ DRSREKRVQE  60
   61 LEIATEKWKI ASKVIFLMEV LKGERDMIMT VRSFEQYRRQ INLPKPHKIS DFIRKSPKLF 120
  121 ELYKDQRGVL WCGLTEGGED LLDEHDKLLE ENGDKAAEHV TRCLMMSVDK KLPLDKIVHF 180
  181 RRDFGLPLDF RINWVYNFPQ HFKVVKLGDG EEYLELVSWN PAWAITELEK KTLGITEDCE 240
  241 HKPGMLSLAF PMKFPPSYKK MYRYRGKIEH FQKRSYLSPY ADARGLEAGS KEFDKRAIAV 300
  301 MHELLSFTLE KRLVTDHLTH FRREFVMPQK LMRIFLKHCG IFYVSERGKR FSVFLTEGYE 360
  361 GPELIEKCPL ILWKEKLLKF TGYRGRKRDI QTYSDTLDME ERELLESGSG DEDLSVGFEK 420
  421 DGDYDDVVTD DDEMDIGEVN DAYEENSKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..235] deduced N/A No confident structure predictions are available.
    2 View Details [236..449] MSA 2.040952 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle