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Protein Overview: RID3_ARATH

General Information:
Name(s) found: RID3_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana GN=RID3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 438 amino acids

    Gene Ontology:
    Cellular Component: heterotrimeric G-protein complex [ISS]
    CUL4 RING ubiquitin ligase complex [ISS]
    Biological Process: biological_process [ND]
    Molecular Function: nucleotide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEITVIASSS IDEGIGSWDL KTGTEQLQFK PCASPAHGLT AVGEKFLASS QLSARNTSGS  60
   61 IFYWSWTKPQ AEVKSYPVEP IKALAANNEG TYLVGGGISG DIYLWEVATG KLLKKWHGHY 120
  121 RSVTCLVFSG DDSLLVSGSQ DGSIRVWSLI RLFDDFQRQQ GNTLYEHNFN EHTMSVTDIV 180
  181 IDYGGCNAVI ISSSEDRTCK VWSLSRGKLL KNIIFPSVIN ALALDPGGCV FYAGARDSKI 240
  241 YIGAINATSE YGTQVLGSVS EKGKAITCLA YCADGNLLIS GSEDGVVCVW DPKSLRHVRT 300
  301 LIHAKGSRKG PVNNIQIVRK TIVANSNKTQ VSWKSRGALI PPPLEKYERP VEDTMDGIVT 360
  361 VDPPPFSDVP VYSSFLSADL IDEQVKELQQ QGSAATEMEM ERLKLEYKRS LQMNEQWQKN 420
  421 YENLLQVVME EEQIGGTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..345] PSI-BLAST 68.69897 No description for 2gnqA was found.
    2 View Details [346..438] PSI-BLAST 5.522879 No description for 2oajA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle