YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: RBL20_ARATH

General Information:
Name(s) found: RBL20_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • Rhomboid-like protein 20 OS=Arabidopsis thaliana GN=RBL20 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 293 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGGPSGFHN APVTKAFVIT SALFTVFFGI QGRSSKLGLS YQDIFEKFRI WKLIMSTFAF  60
   61 SSTPELMFGL YLLYYFRVFE RQIGSNKYSV FILFSGTVSL LLEVILLSLL KDTTANLLTS 120
  121 GPYGLIFASF IPFYLDIPVS TRFRVFGVNF SDKSFIYLAG VQLLLSSWKR SIFPGICGII 180
  181 AGSLYRLNIL GIRKAKFPEF VASFFSRLSF PSFGNSPPPA PSRNIVGTIS PNTGRRAERS 240
  241 QPAPLPSSVE PSEEAITTLV SMGFDRNAAR QALVHARNDV NAATNILLEA QSH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..197] PSI-BLAST 15.39794 No description for 2ic8A was found.
    2 View Details [198..293] PSI-BLAST 6.39794 Ubiquitin-conjugating enzyme E2-25 kDa (Huntington interacting protein 2)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.124092661912738 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle