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Protein Overview: HDG11_ARATH

General Information:
Name(s) found: HDG11_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Homeobox-leucine zipper protein HDG11 OS=Arabidopsis thaliana GN=HDG11 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 722 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS]
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    trichome branching [IGI][IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFVVGVGGS GSGSGGDGGG SHHHDGSETD RKKKRYHRHT AQQIQRLESS FKECPHPDEK  60
   61 QRNQLSRELG LAPRQIKFWF QNRRTQLKAQ HERADNSALK AENDKIRCEN IAIREALKHA 120
  121 ICPNCGGPPV SEDPYFDEQK LRIENAHLRE ELERMSTIAS KYMGRPISQL STLHPMHISP 180
  181 LDLSMTSLTG CGPFGHGPSL DFDLLPGSSM AVGPNNNLQS QPNLAISDMD KPIMTGIALT 240
  241 AMEELLRLLQ TNEPLWTRTD GCRDILNLGS YENVFPRSSN RGKNQNFRVE ASRSSGIVFM 300
  301 NAMALVDMFM DCVKWTELFP SIIAASKTLA VISSGMGGTH EGALHLLYEE MEVLSPLVAT 360
  361 REFCELRYCQ QTEQGSWIVV NVSYDLPQFV SHSQSYRFPS GCLIQDMPNG YSKVTWVEHI 420
  421 ETEEKELVHE LYREIIHRGI AFGADRWVTT LQRMCERFAS LSVPASSSRD LGGVILSPEG 480
  481 KRSMMRLAQR MISNYCLSVS RSNNTRSTVV SELNEVGIRV TAHKSPEPNG TVLCAATTFW 540
  541 LPNSPQNVFN FLKDERTRPQ WDVLSNGNAV QEVAHISNGS HPGNCISVLR GSNATHSNNM 600
  601 LILQESSTDS SGAFVVYSPV DLAALNIAMS GEDPSYIPLL SSGFTISPDG NGSNSEQGGA 660
  661 STSSGRASAS GSLITVGFQI MVSNLPTAKL NMESVETVNN LIGTTVHQIK TALSGPTAST 720
  721 TA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] PSI-BLAST 20.39794 Paired protein
    2 View Details [96..218] deduced N/A No confident structure predictions are available.
    3 View Details [219..469] FFAS03 2.71 No description for 2r55A was found.
    4 View Details [470..591] deduced N/A No confident structure predictions are available.
    5 View Details [592..722] MSA 3.062981 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle