| Protein: | HDG11_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 722 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HDG11_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
799.0 | [0..16] | [716..10] |
|
|
797.0 | [0..10] | [713..91] |
|
|
790.0 | [0..16] | [719..41] |
|
|
789.0 | [0..10] | [716..83] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MSFVVGVGGS GSGSGGDGGG SHHHDGSETD RKKKRYHRHT AQQIQRLESS FKECPHPDEK 60
61 QRNQLSRELG LAPRQIKFWF QNRRTQLKAQ HERAD
|
| Detection Method: |  |
| Confidence: | 20.39794 |
| Match: | 1fjlA |
| Description: | Paired protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [96-218] |
1 11 21 31 41 51
| | | | | |
1 NSALKAENDK IRCENIAIRE ALKHAICPNC GGPPVSEDPY FDEQKLRIEN AHLREELERM 60
61 STIASKYMGR PISQLSTLHP MHISPLDLSM TSLTGCGPFG HGPSLDFDLL PGSSMAVGPN 120
121 NNL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [219-469] |
1 11 21 31 41 51
| | | | | |
1 QSQPNLAISD MDKPIMTGIA LTAMEELLRL LQTNEPLWTR TDGCRDILNL GSYENVFPRS 60
61 SNRGKNQNFR VEASRSSGIV FMNAMALVDM FMDCVKWTEL FPSIIAASKT LAVISSGMGG 120
121 THEGALHLLY EEMEVLSPLV ATREFCELRY CQQTEQGSWI VVNVSYDLPQ FVSHSQSYRF 180
181 PSGCLIQDMP NGYSKVTWVE HIETEEKELV HELYREIIHR GIAFGADRWV TTLQRMCERF 240
241 ASLSVPASSS R
|
| Detection Method: | |
| Confidence: | 2.71 |
| Match: | 2r55A |
| Description: | No description for 2r55A was found. |
|
Region A: Residues: [470-591] |
1 11 21 31 41 51
| | | | | |
1 DLGGVILSPE GKRSMMRLAQ RMISNYCLSV SRSNNTRSTV VSELNEVGIR VTAHKSPEPN 60
61 GTVLCAATTF WLPNSPQNVF NFLKDERTRP QWDVLSNGNA VQEVAHISNG SHPGNCISVL 120
121 RG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [592-722] |
1 11 21 31 41 51
| | | | | |
1 SNATHSNNML ILQESSTDSS GAFVVYSPVD LAALNIAMSG EDPSYIPLLS SGFTISPDGN 60
61 GSNSEQGGAS TSSGRASASG SLITVGFQIM VSNLPTAKLN MESVETVNNL IGTTVHQIKT 120
121 ALSGPTASTT A
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
