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Protein Overview: CARB_ARATH

General Information:
Name(s) found: CARB_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Carbamoyl-phosphate synthase large chain, chloroplastic OS=Arabidopsis thaliana GN=CARB PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1187 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    membrane [IDA]
    Biological Process: arginine biosynthetic process [NAS]
    cellular response to phosphate starvation [IEP]
    Molecular Function: ATP binding [IEA][ISS]
    catalytic activity [IEA]
    carbamoyl-phosphate synthase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNHCLELSS NCSSIFASSK SNPRFSPSKL SYSTFFSRSA IYYRSKPKQA SSSSSFSTFP  60
   61 PCLNRKSSLT HVLKPVSELA DTTTKPFSPE IVGKRTDLKK IMILGAGPIV IGQACEFDYS 120
  121 GTQACKALRE EGYEVILINS NPATIMTDPE TANRTYIAPM TPELVEQVIE KERPDALLPT 180
  181 MGGQTALNLA VALAESGALE KYGVELIGAK LGAIKKAEDR ELFKDAMKNI GLKTPPSGIG 240
  241 TTLDECFDIA EKIGEFPLII RPAFTLGGTG GGIAYNKEEF ESICKSGLAA SATSQVLVEK 300
  301 SLLGWKEYEL EVMRDLADNV VIICSIENID PMGVHTGDSI TVAPAQTLTD REYQRLRDYS 360
  361 IAIIREIGVE CGGSNVQFAV NPVDGEVMII EMNPRVSRSS ALASKATGFP IAKMAAKLSV 420
  421 GYTLDQIPND ITRKTPASFE PSIDYVVTKI PRFAFEKFPG SQPLLTTQMK SVGESMALGR 480
  481 TFQESFQKAL RSLECGFSGW GCAKIKELDW DWDQLKYSLR VPNPDRIHAI YAAMKKGMKI 540
  541 DEIYELSMVD KWFLTQLKEL VDVEQYLMSG TLSEITKEDL YEVKKRGFSD KQIAFATKTT 600
  601 EEEVRTKRIS LGVVPSYKRV DTCAAEFEAH TPYMYSSYDV ECESAPNNKK KVLILGGGPN 660
  661 RIGQGIEFDY CCCHTSFALQ DAGYETIMLN SNPETVSTDY DTSDRLYFEP LTIEDVLNVI 720
  721 DLEKPDGIIV QFGGQTPLKL ALPIKHYLDK HMPMSLSGAG PVRIWGTSPD SIDAAEDRER 780
  781 FNAILDELKI EQPKGGIAKS EADALAIAKE VGYPVVVRPS YVLGGRAMEI VYDDSRLITY 840
  841 LENAVQVDPE RPVLVDKYLS DAIEIDVDTL TDSYGNVVIG GIMEHIEQAG VHSGDSACML 900
  901 PTQTIPASCL QTIRTWTTKL AKKLNVCGLM NCQYAITTSG DVFLLEANPR ASRTVPFVSK 960
  961 AIGHPLAKYA ALVMSGKSLK DLNFEKEVIP KHVSVKEAVF PFEKFQGCDV ILGPEMRSTG1020
 1021 EVMSISSEFS SAFAMAQIAA GQKLPLSGTV FLSLNDMTKP HLEKIAVSFL ELGFKIVATS1080
 1081 GTAHFLELKG IPVERVLKLH EGRPHAADMV ANGQIHLMLI TSSGDALDQK DGRQLRQMAL1140
 1141 AYKVPVITTV AGALATAEGI KSLKSSAIKM TALQDFFEVK NVSSLLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] deduced N/A No confident structure predictions are available.
    2 View Details [97..1187] PSI-BLAST 1000.0 Carbamoyl phosphate synthetase, large subunit connection domain; Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain; Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains; Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle