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Protein Overview: DTX50_ARATH

General Information:
Name(s) found: DTX50_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|15242265|ref|NP_200018.1| MATE efflux protein-related [Arabidopsis thaliana] [NCBI NR]
  • gi|10177740|dbj|BAB11053.1| integral membrane protein-like [Arabidopsis thaliana] [NCBI NR]
  • Protein DETOXIFICATION 50 OS=Arabidopsis thaliana GN=DTX50 PE=2 SV=1 [Swiss-Prot]
  • (Q9FJ87) Integral membrane protein-like [athaliana3702.FASTAC.txt]
  • integral membrane protein-like [Arabidopsis thaliana]gi|15242265|ref|NP_200018.1| MATE efflux protein-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 MATE efflux protein-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | MATE efflux protein-related | chr5:21156159-21157676 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • integral membrane protein-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • antiporter/ drug transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | MATE efflux family protein | chr5:21138933-21140450 FORWARD LENGTH=505 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Integral membrane protein-like OS=Arabidopsis thaliana GN=At5g52050 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 505 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    Biological Process: drug transmembrane transport [IEA]
    Molecular Function: antiporter activity [IEA]
    drug transmembrane transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQSNRVRDE VTLPLLQKTS HLKNHSSVLS VFLNEAISIC KISYPLVLTG LFLYVRSFVS  60
   61 LSFLGGLGDA TLAGGSLAAA FANITGYSLF SGLTMGVESI CSQAFGARRY NYVCASVKRG 120
  121 IILLLVTSLP VTLLWMNMEK ILLILKQDKK LASEAHIFLL YSVPDLVAQS FLHPLRVYLR 180
  181 TQSKTLPLSI CTVIASFLHL PITFFLVSYL GLGIKGIALS GVVSNFNLVA FLFLYICFFE 240
  241 DKLSVNEDEK ITEETCEDSV REWKKLLCLA IPSCISVCLE WWCYEIMILL CGFLLDPKAS 300
  301 VASMGILIQI TSLVYIFPHS LSLGVSTRVG NELGSNQPKR ARRAAIVGLG LSIALGFTAF 360
  361 AFTVSVRNTW AMFFTDDKEI MKLTAMALPI VGLCELGNCP QTTGCGVLRG SARPKIGANI 420
  421 NGVAFYAVGI PVGAVLAFWF GFGFKGLWLG MLAAQITCVI GMMAATCRTD WELEAERAKV 480
  481 LTTAVDCGSS DDDAKEDMEA GMVDK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..250] Pfam 32.853872 No description for PF01554.9 was found. No confident structure predictions are available.
    2 View Details [251..505] Pfam 43.638272 No description for PF01554.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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