YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: BH143_ARATH

General Information:
Name(s) found: BH143_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • Transcription factor bHLH143 OS=Arabidopsis thaliana GN=BHLH143 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 326 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: regulation of transcription [TAS]
    Molecular Function: transcription factor activity [ISS]
    transcription regulator activity [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLDTKQQKW LPLGLNPQAC VQDKATEYFR PGIPFPELGK VYAAEHQFRY LQPPFQALLS  60
   61 RYDQQSCGKQ VSCLNGRSSN GAAPEGALKS SRKRFIVFDQ SGEQTRLLQC GFPLRFPSSM 120
  121 DAERGNILGA LHPEKGFSKD HAIQEKILQH EDHENGEEDS EMHEDTEEIN ALLYSDDDDN 180
  181 DDWESDDEVM STGHSPFTVE QQACNITTEE LDETESTVDG PLLKRQKLLD HSYRDSSPSL 240
  241 VGTTKVKGLS DENLPESNIS SKQETGSGLS DEQSRKDKIH TALRILESVV PGAKGKEALL 300
  301 LLDEAIDYLK LLKQSLNSSK GLNNHW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..250] deduced N/A No confident structure predictions are available.
    2 View Details [251..326] PSI-BLAST 14.522879 SREBP-1a

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.12507195426228 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.43204604575196 bayes_pls_golite062009
  • DNA binding
    		•  0.40884226851256 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.31759335140578 bayes_pls_golite062009
  • transcription factor activity
    		•  0.09721565916723 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle