| Protein: | BH143_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 326 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BH143_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
231.0 | [0..1] | [324..1] |
|
Region A: Residues: [1-250] |
1 11 21 31 41 51
| | | | | |
1 MPLDTKQQKW LPLGLNPQAC VQDKATEYFR PGIPFPELGK VYAAEHQFRY LQPPFQALLS 60
61 RYDQQSCGKQ VSCLNGRSSN GAAPEGALKS SRKRFIVFDQ SGEQTRLLQC GFPLRFPSSM 120
121 DAERGNILGA LHPEKGFSKD HAIQEKILQH EDHENGEEDS EMHEDTEEIN ALLYSDDDDN 180
181 DDWESDDEVM STGHSPFTVE QQACNITTEE LDETESTVDG PLLKRQKLLD HSYRDSSPSL 240
241 VGTTKVKGLS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [251-326] |
1 11 21 31 41 51
| | | | | |
1 DENLPESNIS SKQETGSGLS DEQSRKDKIH TALRILESVV PGAKGKEALL LLDEAIDYLK 60
61 LLKQSLNSSK GLNNHW
|
| Detection Method: | |
| Confidence: | 14.522879 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.12507195426228 | bayes_pls_golite062009 |
| nucleic acid binding | 0.43204604575196 | bayes_pls_golite062009 |
| DNA binding | 0.40884226851256 | bayes_pls_golite062009 |
| transcription regulator activity | 0.31759335140578 | bayes_pls_golite062009 |
| transcription factor activity | 0.09721565916723 | bayes_pls_golite062009 |
