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Protein Overview: FB285_ARATH

General Information:
Name(s) found: FB285_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9757737|dbj|BAB08262.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|75262767|sp|Q9FNK5.1|FB285_ARATH RecName: Full=F-box protein At5g46170 [NCBI NR]
  • gi|23296883|gb|AAN13195.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17979207|gb|AAL49842.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15237391|ref|NP_199429.1| F-box family protein [Arabidopsis thaliana] [NCBI NR]
  • F-box protein At5g46170 OS=Arabidopsis thaliana GN=At5g46170 PE=2 SV=1 [Swiss-Prot]
  • (Q9FNK5) Genomic DNA, chromosome 5, P1 clone:MCL19 (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|17979207|gb|AAL49842.1| unknown protein [Arabidopsis thaliana]gi|9757737|dbj|BAB08262.1| unnamed protein product [Arabidopsis thaliana]gi|15237391|ref|NP_199429.1| F-box family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 F-box family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | F-box family protein | chr5:18732865-18734052 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | F-box family protein | chr5:18715638-18716825 REVERSE LENGTH=395 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 395 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: heat acclimation [IEP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVIIPRSDP PSRIHPEPPQ TLEIDHFDHL PDSILLLVFN KIGDVKALGR CCVVSRRFHS  60
   61 LVPQVDNVVV RVDCVISDDD SSSLSSIKSR SGSSAGSFSA IFRLVVGGIV KPLQALGQFL 120
  121 GTKRSSSSCG GSGSSSSSLS ISGDDDGGEI EQGGVTHHSP TQVLKNFDEI RYLRIELPSG 180
  181 ELGIDDGVLL KWRAEFGSTL DNCVILGASS VIPPNPMRVS QACDTTTVVE APGSGSDDNG 240
  241 SIPESFYTNG GLKLRVVWTI SSLIAASARH YLLQPIIAEH KTLDSLVLTD SDGQGVLCMN 300
  301 RDQLEELRVK PLAASSASKR TLVPALNMRL WYAPTLELPD GTVLKGATLV AIRPSESKKE 360
  361 VSDISWVSSA FEEPYETAAK MLVKRRTYCL EMNSF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..217] PSI-BLAST 15.69897 Skp2; Cyclin A/CDK2-associated p19, Skp2
    2 View Details [218..395] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle