YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SRO1_ARATH

General Information:
Name(s) found: SRO1_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|23297349|gb|AAN12947.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20197351|gb|AAC36170.2| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18403862|ref|NP_565806.1| SRO1 (SIMILAR TO RCD ONE 1); NAD+ ADP-ribosyltransferase [Arabidopsis thaliana] [NCBI NR]
  • Probable inactive poly [ADP-ribose] polymerase SRO1 OS=Arabidopsis thaliana GN=SRO1 PE=1 SV=2 [Swiss-Prot]
  • (O82289) Expressed protein (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|20197351|gb|AAC36170.2| expressed protein [Arabidopsis thaliana]gi|18403862|ref|NP_565806.1| WWE domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Encodes a WWE domain-containing protein with 76% similarity to RCD1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SRO1 | SRO1 (SIMILAR TO RCD ONE 1); NAD+ ADP-ribosyltransferase | chr2:14923977-14926277 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • expressed protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SRO1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SRO1 | similar to RCD one 1 | chr2:14916898-14919198 REVERSE LENGTH=568 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 568 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: embryonic development [IMP]
    photoperiodism, flowering [IMP]
    response to oxidative stress [IMP]
    response to salt stress [IMP]
    response to osmotic stress [IMP]
    lateral root morphogenesis [IMP]
    Molecular Function: NAD+ ADP-ribosyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAKIVKVSD SSYKDGLGKK RKHPGNYTPY DSGRSYAKLQ WVLSPNSSTQ KLEKRRNLDG  60
   61 ENKVIVSENH VEKSLVRYFS YYKKTGVPKR VMFHENGEWI DLPDHILCDI RNDLEAKRAT 120
  121 IEFNWCGRHF LLDFLHMYRL DLETGVKTQL AWIDIAGKCF FPETFDTLER DGCHHIRGED 180
  181 PEQHDQREIK LHIEIDVNSG ELPRLNLNVV TDESGDNMDD FQAVQRSSNG PNDEASEDSC 240
  241 SRELDDAVEK WDKTETDRFS GVKPAEEELD KDAVKQMFAL GAATLGHVES LDVYQFSSEI 300
  301 AKARLSLFQK QADITKKHRG DANIRYAWVP AKKEVLSAVM MHGLGVGGAF IKKSMYGVGV 360
  361 HAANCPYFSA RYCDIDDNGV RHMVLCRVIM GNMEPLRGDN TQYFTGGEEY DNGVDDVESP 420
  421 KHYLIWNMNM NTHIYPEFVV SFKLSIPNAE GNILPTTQSR HESSGLTLEG PKGSPSNEPG 480
  481 RVSNGGSGSE KNSSSSRRPR SPIMPFPLLF KAISSKIARK DMDLIIAGYQ ELREKKVSRK 540
  541 EFYKTLSMIV GDDDLLISTI TGLQRSLG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..94] MSA 2.069994 View MSA. No confident structure predictions are available.
    2 View Details [95..447] PSI-BLAST 75.69897 THE CATALYTIC FRAGMENT OF POLY(ADP-RIBOSE) POLYMERASE COMPLEXED WITH CARBA-NAD
    3 View Details [448..568] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle