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Protein Overview: DEGP9_ARATH

General Information:
Name(s) found: DEGP9_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Protease Do-like 9 OS=Arabidopsis thaliana GN=DEGP9 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 592 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    nucleolus [IDA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: protein binding [IEA]
    catalytic activity [IEA]
    serine-type endopeptidase activity [IEA]
    serine-type peptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSEKRGRK HKRQDASSAE NAGGEVKEAS ANEASLPQSP EPVSASEANP SPSRRSRGRG  60
   61 KKRRLNNESE AGNQRTSSPE RSRSRLHHSD TKNGDCSNGM IVSTTTESIP AAPSWETVVK 120
  121 VVPSMDAVVK VFCVHTEPNF SLPWQRKRQY SSGSSGFIIG GRRVLTNAHS VEHHTQVKLK 180
  181 KRGSDTKYLA TVLAIGTECD IALLTVTDDE FWEGVSPVEF GDLPALQDAV TVVGYPIGGD 240
  241 TISVTSGVVS RMEILSYVHG STELLGLQID AAINSGNSGG PAFNDKGKCV GIAFQSLKHE 300
  301 DAENIGYVIP TPVIVHFIQD YEKHDKYTGF PVLGIEWQKM ENPDLRKSMG MESHQKGVRI 360
  361 RRIEPTAPES QVLKPSDIIL SFDGVNIAND GTVPFRHGER IGFSYLISQK YTGDSALVKV 420
  421 LRNKEILEFN IKLAIHKRLI PAHISGKPPS YFIVAGFVFT TVSVPYLRSE YGKEYEFDAP 480
  481 VKLLEKHLHA MAQSVDEQLV VVSQVLVSDI NIGYEEIVNT QVVAFNGKPV KNLKGLAGMV 540
  541 ENCEDEYMKF NLDYDQIVVL DTKTAKEATL DILTTHCIPS AMSDDLKTEE RN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..65] deduced N/A No confident structure predictions are available.
    2 View Details [66..592] PSI-BLAST 63.39794 Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle