YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|20259279, gi|...

General Information:
Name(s) found: gi|23507755 [NCBI NR]
gi|20259279 [NCBI NR]
gi|20197107 [NCBI NR]
gi|18405038 [NCBI NR]
gi|15450345 [NCBI NR]
gi|14532652 [NCBI NR]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • gi|23507755|gb|AAN38681.1| At2g39400/F12L6.6 [Arabidopsis thaliana] [NCBI NR]
  • gi|20259279|gb|AAM14375.1| putative phospholipase [Arabidopsis thaliana] [NCBI NR]
  • gi|20197107|gb|AAC27831.2| putative phospholipase [Arabidopsis thaliana] [NCBI NR]
  • gi|18405038|ref|NP_565903.1| hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15450345|gb|AAK96466.1| At2g39400/F12L6.6 [Arabidopsis thaliana] [NCBI NR]
  • gi|14532652|gb|AAK64054.1| putative phospholipase [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 311 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: hydrolase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMYEEDFVL NSRGMKLFTC VWKPVKQEPK ALLFLCHGYA MESSITMNSA ATRLANAGFA  60
   61 VYGMDYEGHG KSEGLNGYIS NFDDLVDDVS NHYSTICERE ENKGKMRFLL GESMGGAVVL 120
  121 LLARKKPDFW DGAVLVAPMC KLADEIKPHP VVISILIKLA KFIPTWKIVP GNDIIDIAIK 180
  181 EPHIRNQVRE NKYCYKGRPR LNTAYQLLLV SLDLEKNLHQ VSIPFIVLHG EDDKVTDKSI 240
  241 SKMLYEVASS SDKTFKLYPK MWHALLYGET NENSEIVFGD IINWLEDRAT DSNGGLESQL 300
  301 KHKHDGFLKH K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..311] PSI-BLAST 43.39794 CHLOROPEROXIDASE F/PROPIONATE COMPLEX

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • hydrolase activity
    		•  0.716449555827534 bayes_pls_golite062009
  • lipase activity
    		•  0.602417432627875 bayes_pls_golite062009
  • carboxylesterase activity
    		•  0.535924720022784 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.307380251731525 bayes_pls_golite062009
  • palmitoyl-(protein) hydrolase activity
    		•  0.054530214464529 bayes_pls_golite062009
  • palmitoyl-CoA hydrolase activity
    		•  0.00303228391703936 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle