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View Structure Prediction Details

Protein: gi|20259279, gi|...
Organism: Arabidopsis thaliana
Length: 311 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20259279, gi|....

Description E-value Query
Range
Subject
Range
gi|13430614, gi|... - gi|18417885|ref|NP_568327.1| hydrolase, alpha/beta fold family protein [Arabidopsis thaliana], gi|15...
203.0 [0..2] [295..53]

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Predicted Domain #1
Region A:
Residues: [1-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMYEEDFVL NSRGMKLFTC VWKPVKQEPK ALLFLCHGYA MESSITMNSA ATRLANAGFA  60
   61 VYGMDYEGHG KSEGLNGYIS NFDDLVDDVS NHYSTICERE ENKGKMRFLL GESMGGAVVL 120
  121 LLARKKPDFW DGAVLVAPMC KLADEIKPHP VVISILIKLA KFIPTWKIVP GNDIIDIAIK 180
  181 EPHIRNQVRE NKYCYKGRPR LNTAYQLLLV SLDLEKNLHQ VSIPFIVLHG EDDKVTDKSI 240
  241 SKMLYEVASS SDKTFKLYPK MWHALLYGET NENSEIVFGD IINWLEDRAT DSNGGLESQL 300
  301 KHKHDGFLKH K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.39794
Match: 1a8sA
Description: CHLOROPEROXIDASE F/PROPIONATE COMPLEX
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity 0.716449555827534 bayes_pls_golite062009
lipase activity 0.602417432627875 bayes_pls_golite062009
carboxylesterase activity 0.535924720022784 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.307380251731525 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 0.054530214464529 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.00303228391703936 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle