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Protein Overview: LUH_ARATH

General Information:
Name(s) found: LUH_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79593803|ref|NP_850195.2| WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T00798 hypothetical protein At2g32700 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|30685401|ref|NP_850194.1| WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30685398|ref|NP_850193.1| WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30685392|ref|NP_850192.1| WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|2914703|gb|AAC04493.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|25090107|gb|AAN72230.1| At2g32700/F24L7.16 [Arabidopsis thaliana] [NCBI NR]
  • gi|18403052|ref|NP_565749.1| WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13605815|gb|AAK32893.1|AF367306_1 At2g32700/F24L7.16 [Arabidopsis thaliana] [NCBI NR]
  • Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana GN=LUH PE=1 SV=1 [Swiss-Prot]
  • (O48847) F24L7.16 protein (AT2G32700/F24L7.16) [athaliana3702.FASTAC.txt]
  • expressed protein [Arabidopsis thaliana]gi|13605815|gb|AAK32893.1| At2g32700/F24L7.16 [Arabidopsis thaliana]gi|25090107|gb|AAN72230.1| At2g32700/F24L7.16 [Arabidopsis thaliana]gi|7486097|pir||T00798 hypothetical protein At2g32700 [imported] - Arabidops [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 WD-40 repeat family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | WD-40 repeat family protein | chr2:13874312-13878921 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g32700/F24L7.16 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • expressed protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: LUH | LEUNIG_homolog | chr2:13867235-13871844 FORWARD LENGTH=787 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At2g32700/F24L7.16 OS=Arabidopsis thaliana GN=LUH PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 787 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: embryonic development [IGI]
    flower development [IGI]
    negative regulation of transcription [IPI]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQSNWEADK MLDVYIYDYL VKKKLHNTAK SFMTEGKVSP DPVAIDAPGG FLFEWWSVFW  60
   61 DIFIARTNEK HSEAAAAYIE AQQGKAKEQQ MQIQQLQMMR QAQMQRRDPN HPSLGGPMNA 120
  121 IGSEGMIGQS NASALAAKMY EERMKQPNPM NSETSQPHLD ARMALLKSAT NHHGQIVQGN 180
  181 HQGGVSAALQ QIQSRTQQPT EIKTEVNLGT SPRQLPVDPS TVYGQGILQS KPGMGSAGLN 240
  241 PGVSGLPLKG WPLTGIEQMR PGLGGPQVQK SFLQNQSQFQ LSPQQQQHQM LAQVQAQGNM 300
  301 TNSPMYGGDM DPRRFTGLPR GNLNPKDGQQ NANDGSIGSP MQSSSSKHIS MPPVQQSSSQ 360
  361 QQDHLLSQQS QQNNRKRKGP SSSGPANSTG TGNTVGPSNS QPSTPSTHTP VDGVAIAGNM 420
  421 HHVNSMPKGP MMYGSDGIGG LASSANQLLQ DDMDQFGDVG ALEDNVESFL SQDDGDGGSL 480
  481 FGTLKRNSSV HTETSKPFSF NEVSCIRKSA SKVICCSFSY DGKLLASAGH DKKVFIWNME 540
  541 TLQVESTPEE HAHIITDVRF RPNSTQLATS SFDKTIKIWD ASDPGYFLRT ISGHAAPVMS 600
  601 IDFHPKKTEL LCSCDSNNDI RFWDINASCV RAVKGASTQV RFQPRTGQFL AAASENTVSI 660
  661 FDIENNNKRV NIFKGHSSNV HSVCWSPNGE LVASVSEDAV KLWSLSSGDC IHELSNSGNK 720
  721 FHSVVFHPSY PDLLVIGGYQ AIELWNTMEN KCMTVAGHEC VISALAQSPS TGVVASASHD 780
  781 KSVKIWK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..177] MSA 1.124963 View MSA. No confident structure predictions are available.
    2 View Details [178..249] deduced N/A No confident structure predictions are available.
    3 View Details [250..356] PSI-BLAST 17.221849 Crystal Structure analysis of the beta-propeller protein Ski8p
    4 View Details [357..706] PSI-BLAST 56.045757 Cdc4 F-box and linker domains; Cdc4 propeller domain
    5 View Details [707..787] PSI-BLAST 82.221849 No description for 2gnqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle