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Protein Overview: gi|10177535, gi|...

General Information:
Name(s) found: gi|23506141 [NCBI NR]
gi|18425086 [NCBI NR]
gi|14488063 [NCBI NR]
gi|10177535 [NCBI NR]
Description(s) found:
Found 16 descriptions.
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  • gi|23506141|gb|AAN31082.1| At5g66540/K1F13_21 [Arabidopsis thaliana] [NCBI NR]
  • gi|18425086|ref|NP_569037.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|14488063|gb|AAK63852.1|AF389279_1 AT5g66540/K1F13_21 [Arabidopsis thaliana] [NCBI NR]
  • gi|10177535|dbj|BAB10930.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 524 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytosol [IDA]
    nucleolus [IDA]
    Biological Process: rRNA processing [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVKDSGFE ALEKLKATEP PVFLAPSSIS EDARSASQYL FMKLKPHNPK CPFDQLSSDG  60
   61 FDAEQIWQQI DMQSQPLLTS LRQEVKRFAK NPEEIRKLGK LALKVSHEDD IDEMDMDGFD 120
  121 SDDVDDEDKE IESNDSEGED EEEEEEDEEE EEEEEEEEEE EKDGDNEGIE DKFFKIKELE 180
  181 EFLEEGEAEE YGIDHKNKKG VAQRKKQNLS DDEDEEDDDD EEEDVEFDAF AGGDDEETDK 240
  241 LGKARYDDFF GGKKETKMKL KDLSEDEEAE IENKGNEKLS THERARLKLQ SKIEQMEKAN 300
  301 LDPKHWTMQG EITAAKRPMN SALEVDLDFE HNARPAPVIT EEVTASLEDL IKSRIIEARF 360
  361 DDVQRAPRLP TKGKREAKEL DESKSKKGLA EVYEAEYFQK ANPAFAPTTH SDELKKEASM 420
  421 LFKKLCLKLD ALSHFHFTPK PVIEEMSIPN VSAIAMEEVA PVAVSDAAML APEEIFSGKG 480
  481 DIKDESELTQ EDRKRRRANK KRKFKAESAN EPPKKALDTS TKNP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [78..304] MSA 5.112997 View MSA. No confident structure predictions are available.
    3 View Details [305..524] MSA 1.102947 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle