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Protein Overview: gi|110740771, gi...

General Information:
Name(s) found: gi|7487509 [NCBI NR]
gi|7269622 [NCBI NR]
gi|4469019 [NCBI NR]
gi|23197836 [NCBI NR]
gi|21553404 [NCBI NR]
gi|20260328 [NCBI NR]
gi|15234242 [NCBI NR]
gi|110740771 [NCBI NR]
Description(s) found:
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  • pir||T05873 hypothetical protein T29A15.170 - Arabidopsis thaliana [NCBI NR]
  • gi|7269622|emb|CAB81418.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4469019|emb|CAB38280.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|23197836|gb|AAN15445.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21553404|gb|AAM62497.1| 26S proteasome regulatory particle chain RPT6-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20260328|gb|AAM13062.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15234242|ref|NP_194498.1| MSP1 protein, putative / intramitochondrial sorting protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|110740771|dbj|BAE98483.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9T090) Hypothetical protein (26S proteasome regulatory particle chain RPT6-like protein) [athaliana3702.FASTAC.txt]
  • 26S proteasome regulatory particle chain RPT6-like protein [Arabidopsis thaliana]gi|23197836|gb|AAN15445.1| putative protein [Arabidopsis thaliana]gi|7269622|emb|CAB81418.1| putative protein [Arabidopsis thaliana]gi|4469019|emb|CAB38280.1| putative pro [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 MSP1 protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | MSP1 protein, putative / intramitochondrial sorting protein, putative | chr4:13821269-13823089 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • 26S proteasome regulatory particle chain RPT6-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:13821263-13823083 FORWARD LENGTH=398 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • 26S proteasome regulatory particle chain RPT6-like protein OS=Arabidopsis thaliana GN=AT4g27680 PE=2 SV=1 [ARATH-contam.fasta]
  • 26S proteasome regulatory particle chain RPT6-like protein OS=Arabidopsis thaliana GN=At4g27680 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 398 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: NONE FOUND
    Molecular Function: ATPase activity [ISS]
    nucleotide binding [IEA]
    ATP binding [IEA]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGSSETKIL QELILYAASA AFSCLVLFAG LRHLDPNREA SKKALEHKKE ISKRLGRPLV  60
   61 QTNPYEDVIA CDVINPDHID VEFGSIGGLE TIKQALYELV ILPLKRPELF AYGKLLGPQK 120
  121 GVLLYGPPGT GKTMLAKAIA KESGAVFINV RVSNLMSKWF GDAQKLVSAV FSLAYKLQPA 180
  181 IIFIDEVESF LGQRRSTDHE AMANMKTEFM ALWDGFSTDP HARVMVLAAT NRPSELDEAI 240
  241 LRRLPQAFEI GIPDRRERAE ILKVTLKGER VEPDIDFDHI ARLCEGYTGS DIFELCKKAA 300
  301 YFPIREILDA ERKGKPCLDP RPLSQLDLEK VLATSKKTQV AAGEYSLSSQ SSAWRGSREP 360
  361 DEVQAAISGI SKLLVSQIIN LQSESQDSWQ RDPEEDSR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..398] PSI-BLAST 63.0 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle