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View Structure Prediction Details

Protein: gi|110740771, gi...
Organism: Arabidopsis thaliana
Length: 398 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110740771, gi....

Description E-value Query
Range
Subject
Range
gi|3257095, gi|1... - gi|3257095|dbj|BAA29778.1| 840aa long hypothetical cell division control protein (transitional endop...
gi|7435754 - pir||H71114 probable cell division control protein (transitional endoplasmic reticulum ATPase) - Pyr...
269.0 [0..1] [360..467]

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Predicted Domain #1
Region A:
Residues: [1-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGSSETKIL QELILYAASA AFSCLVLFAG LRHLDPNREA SKKALEHKKE ISKRLGRPLV  60
   61 QTNPYEDVIA CDVINPDHID VEFGSIGGLE TIKQALYELV ILPLKRPELF AYGKLLGPQK 120
  121 GVLLYGPPGT GKTMLAKAIA KESGAVFINV RVSNLMSKWF GDAQKLVSAV FSLAYKLQPA 180
  181 IIFIDEVESF LGQRRSTDHE AMANMKTEFM ALWDGFSTDP HARVMVLAAT NRPSELDEAI 240
  241 LRRLPQAFEI GIPDRRERAE ILKVTLKGER VEPDIDFDHI ARLCEGYTGS DIFELCKKAA 300
  301 YFPIREILDA ERKGKPCLDP RPLSQLDLEK VLATSKKTQV AAGEYSLSSQ SSAWRGSREP 360
  361 DEVQAAISGI SKLLVSQIIN LQSESQDSWQ RDPEEDSR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.0
Match: 1oz4A
Description: VCP/p97
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle