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Protein Overview: GUN6_ARATH

General Information:
Name(s) found: GUN6_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||A96668 probable endo-beta-1,4-glucanase F15H21.9 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|23506049|gb|AAN28884.1| At1g64390/F15H21_9 [Arabidopsis thaliana] [NCBI NR]
  • gi|15217630|ref|NP_176621.1| AtGH9C2 (Arabidopsis thaliana glycosyl hydrolase 9C2); carbohydrate binding / catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [NCBI NR]
  • gi|13937173|gb|AAK50080.1|AF372940_1 At1g64390/F15H21_9 [Arabidopsis thaliana] [NCBI NR]
  • gi|12323464|gb|AAG51703.1|AC066689_2 endo-beta-1,4-glucanase, putative; 32345-29032 [Arabidopsis thaliana] [NCBI NR]
  • gi|114149314|sp|Q42059.2|GUN6_ARATH RecName: Full=Endoglucanase 6; AltName: Full=Endo-1,4-beta glucanase 6; Flags: Precursor [NCBI NR]
  • Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2 [Swiss-Prot]
  • (Q9C7W3) Endo-beta-1,4-glucanase, putative (At1g64390/F15H21_9) [athaliana3702.FASTAC.txt]
  • At1g64390/F15H21_9 [Arabidopsis thaliana]gi|13937173|gb|AAK50080.1| At1g64390/F15H21_9 [Arabidopsis thaliana]gi|25404480|pir||A96668 probable endo-beta-1,4-glucanase F15H21.9 [imported] - Arabidopsis thalianagi|12323464|gb|AAG51703.1| endo-beta-1,4-glu [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Endo-1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATGH9C2 | ATGH9C2 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9C2); hydrolase, hydrolyzing O-glycosyl compounds | chr1:23914992-23918305 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At1g64390/F15H21_9 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • endo-beta-1,4-glucanase, putative; 32345-29032 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Endoglucanase 6 precursor (Endo-1,4-beta glucanase 6) [nr-271106-contam.fasta]
  • | Symbols: AtGH9C2, GH9C2 | glycosyl hydrolase 9C2 | chr1:23911329-23914642 FORWARD LENGTH=620 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 620 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    carbohydrate binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT  60
   61 DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY GNQLQANGEL GNSIDAIKWG 120
  121 TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM 180
  181 AAASIVFRRS NPVYSRLLLT HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA 240
  241 AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA 300
  301 PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS 360
  361 SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV GYGNNFPQRV HHRGSSIVSV 420
  421 KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP 480
  481 LLGVLARLSS GHSGYSQFLP VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS 540
  541 KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE 600
  601 FVYIHSTTPA NVAVSSYTLA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..620] PSI-BLAST 165.0 Endo/exocellulase:cellobiose E-4, N-terminal domain; Endo/exocellulase:cellobiose E-4, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  1.97294566761911 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  1.84501307796637 bayes_pls_golite062009
  • catalytic activity
    		•  1.16285856935495 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0225207980048139 bayes_pls_golite062009
  • trehalase activity
    		•  0.0127245623766304 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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