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View Structure Prediction Details

Protein: GUN6_ARATH
Organism: Arabidopsis thaliana
Length: 620 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GUN6_ARATH.

Description E-value Query
Range
Subject
Range
gi|23397112 - gi|23397112|gb|AAN31840.1| putative endo-beta-1,4-glucanase [Arabidopsis thaliana]
733.0 [0..1] [620..1]

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Predicted Domain #1
Region A:
Residues: [1-620]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKFAPVAAL LLLLLCFPVA FSGHDYGQAL SKSLLFFEAQ RSGVLPRNQR VTWRSHSGLT  60
   61 DGKSSGVNLV GGYYDAGDNV KFGLPMAFTV TMMAWSVIEY GNQLQANGEL GNSIDAIKWG 120
  121 TDYFIKAHPE PNVLYGEVGD GNTDHYCWQR PEEMTTDRKA YRIDPSNPGS DLAGETAAAM 180
  181 AAASIVFRRS NPVYSRLLLT HAYQLFDFAD KYRGKYDSSI TVAQKYYRSV SGYNDELLWA 240
  241 AAWLYQASNN QFYLDYLGRN GDAMGGTGWS MTEFGWDVKY AGVQTLVAKF LMQGKAGRHA 300
  301 PVFRKYQEKA DSFMCSLLGK SSRNIQKTPG GLIFRQRWNN MQFVTSASFL TTVYSDYLTS 360
  361 SRSNLRCAAG NVAPSQLLSF AKSQVDYILG DNPRATSYMV GYGNNFPQRV HHRGSSIVSV 420
  421 KVDRTFVTCR GGYATWFSRK GSDPNLLTGA IVGGPDAYDN FADRRDNYEQ TEPATYNNAP 480
  481 LLGVLARLSS GHSGYSQFLP VVPAPVVRRP MPIRRPKVTT PVRASGPVAI VQKITSSWVS 540
  541 KGRTYYRYST TVINKSSRPL KSLNLSIKNL YGPIWGLSRS GNSFGLPSWM HSLPSGKSLE 600
  601 FVYIHSTTPA NVAVSSYTLA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 165.0
Match: 1js4A
Description: Endo/exocellulase:cellobiose E-4, N-terminal domain; Endo/exocellulase:cellobiose E-4, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, hydrolyzing O-glycosyl compounds 1.97294566761911 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 1.84501307796637 bayes_pls_golite062009
catalytic activity 1.16285856935495 bayes_pls_golite062009
hydrolase activity 0.0225207980048139 bayes_pls_golite062009
trehalase activity 0.0127245623766304 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle