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Protein Overview: PUB45_ARATH

General Information:
Name(s) found: PUB45_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75169304|sp|Q9C7G1.1|PUB45_ARATH RecName: Full=U-box domain-containing protein 45; AltName: Full=Plant U-box protein 45 [NCBI NR]
  • gi|27363436|gb|AAO11637.1| At1g27910/F13K9_2 [Arabidopsis thaliana] [NCBI NR]
  • pir||D86404 unknown protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20453195|gb|AAM19837.1| At1g27910/F13K9_2 [Arabidopsis thaliana] [NCBI NR]
  • gi|15217772|ref|NP_174112.1| PUB45 (PLANT U-BOX 45); ubiquitin-protein ligase [Arabidopsis thaliana] [NCBI NR]
  • gi|12322984|gb|AAG51474.1|AC069471_5 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45 PE=1 SV=1 [Swiss-Prot]
  • (Q9C7G1) Hypothetical protein (At1g27910/F13K9_2) [athaliana3702.FASTAC.txt]
  • At1g27910/F13K9_2 [Arabidopsis thaliana]gi|27363436|gb|AAO11637.1| At1g27910/F13K9_2 [Arabidopsis thaliana]gi|25403044|pir||D86404 unknown protein [imported] - Arabidopsis thalianagi|12322984|gb|AAG51474.1| unknown protein [Arabidopsis thaliana]gi|152 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 U-box domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | U-box domain-containing protein | chr1:9720949-9723962 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At1g27910/F13K9_2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ubiquitin-protein ligase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:9720962-9723975 REVERSE LENGTH=768 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 768 amino acids

    Gene Ontology:
    Cellular Component: ubiquitin ligase complex [IEA]
    Biological Process: protein ubiquitination [IDA]
    Molecular Function: ubiquitin-protein ligase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVNEVEENF FAPGDAKLHG KMCNALSVIY CKIMSIFPSL EAARPRSKSG IQALCSLHVV  60
   61 LEKVKNILRH CTESSKLYLA ITGDSVVLKF EKAKSSLTDS LRRVEDIVQQ SIGSQLLEIL 120
  121 MELENTEFSL DPAEKEIGDQ IIGLLQQGGN FESSSDNNEL EVFHQAATRL GITSSRAALT 180
  181 ERRCLKKLIE RARMEDDKRK ESIVAYLLHL MRKYSKLFRS EIWDDNDSQG SSSLPCSPTI 240
  241 QGSIDDAHGR AFDRQLSKLS SFNFRSCNNN RRSSQMSVPP EELRCPISLQ LMYDPVIIAS 300
  301 GQTYERICIE KWFSDGHNTC PKTHQQLSHL CLTPNYCVKA LISSWCEQNG VQVPDGPPES 360
  361 LDLNYWRLAL SVSESTDTRS AKRVGSCKLK DVKVVPLEES GTIKEEACES EYQEDQVTLV 420
  421 ERCTELLTTL TDVDTLRKKC RVVEQIRVLL KDDEEARILM GENGCVEALL QFLGSALNEN 480
  481 NASAQKVGAM ALFNLAVDNN RNKELMLASG IIPLLEEMLC NPHSHGSVTA IYLNLSCLEE 540
  541 AKPVIGSSLA VPFMVNLLWT ETEVQCKVDA LHSLFHLSTY PPNIPCLLSA DLVNALQSLT 600
  601 ISDEQRWTEK SLAVLLNLVL NEAGKDEMVS APSLVSNLCT ILDTGEPNEQ EQAVSLLLIL 660
  661 CNHSEICSEM VLQEGVIPSL VSISVNGTQR GRERAQKLLT LFRELRQRDQ THLTEPQHTE 720
  721 VTSPEDGFSV ASAAVTETKP QCKSASRKKM GRAFSFLWKS KSFSVYQC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..370] PSI-BLAST 38.09691 No description for 2qizA was found.
    2 View Details [371..768] PSI-BLAST 45.39794 Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.373576425899935 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle