| Protein: | PUB45_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 768 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB45_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
361.0 | [0..1] | [763..1] |
|
Region A: Residues: [1-370] |
1 11 21 31 41 51
| | | | | |
1 MDVNEVEENF FAPGDAKLHG KMCNALSVIY CKIMSIFPSL EAARPRSKSG IQALCSLHVV 60
61 LEKVKNILRH CTESSKLYLA ITGDSVVLKF EKAKSSLTDS LRRVEDIVQQ SIGSQLLEIL 120
121 MELENTEFSL DPAEKEIGDQ IIGLLQQGGN FESSSDNNEL EVFHQAATRL GITSSRAALT 180
181 ERRCLKKLIE RARMEDDKRK ESIVAYLLHL MRKYSKLFRS EIWDDNDSQG SSSLPCSPTI 240
241 QGSIDDAHGR AFDRQLSKLS SFNFRSCNNN RRSSQMSVPP EELRCPISLQ LMYDPVIIAS 300
301 GQTYERICIE KWFSDGHNTC PKTHQQLSHL CLTPNYCVKA LISSWCEQNG VQVPDGPPES 360
361 LDLNYWRLAL
|
| Detection Method: |  |
| Confidence: | 38.09691 |
| Match: | 2qizA |
| Description: | No description for 2qizA was found. |
|
Region A: Residues: [371-768] |
1 11 21 31 41 51
| | | | | |
1 SVSESTDTRS AKRVGSCKLK DVKVVPLEES GTIKEEACES EYQEDQVTLV ERCTELLTTL 60
61 TDVDTLRKKC RVVEQIRVLL KDDEEARILM GENGCVEALL QFLGSALNEN NASAQKVGAM 120
121 ALFNLAVDNN RNKELMLASG IIPLLEEMLC NPHSHGSVTA IYLNLSCLEE AKPVIGSSLA 180
181 VPFMVNLLWT ETEVQCKVDA LHSLFHLSTY PPNIPCLLSA DLVNALQSLT ISDEQRWTEK 240
241 SLAVLLNLVL NEAGKDEMVS APSLVSNLCT ILDTGEPNEQ EQAVSLLLIL CNHSEICSEM 300
301 VLQEGVIPSL VSISVNGTQR GRERAQKLLT LFRELRQRDQ THLTEPQHTE VTSPEDGFSV 360
361 ASAAVTETKP QCKSASRKKM GRAFSFLWKS KSFSVYQC
|
| Detection Method: | |
| Confidence: | 45.39794 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.373576425899935 | bayes_pls_golite062009 |
