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Protein Overview: gi|11274017, gi|...

General Information:
Name(s) found: gi|8101958 [NCBI NR]
gi|7263561 [NCBI NR]
gi|23197768 [NCBI NR]
gi|22530974 [NCBI NR]
gi|15228182 [NCBI NR]
gi|11274017 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|8101958|gb|AAF72669.1|AF262734_1 putative transcription factor MYB109 [Arabidopsis thaliana] [NCBI NR]
  • gi|7263561|emb|CAB81598.1| MYB transcription factor-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|23197768|gb|AAN15411.1| MYB transcription factor-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22530974|gb|AAM96991.1| MYB transcription factor-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15228182|ref|NP_191132.1| MYB109 (myb domain protein 109); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||T47712 MYB transcription factor-like protein - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 399 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    Biological Process: response to gibberellin stimulus [IEP]
    response to abscisic acid stimulus [IEP]
    response to salt stress [IEP]
    response to jasmonic acid stimulus [IEP]
    response to salicylic acid stimulus [IEP]
    regulation of transcription [TAS]
    response to ethylene stimulus [IEP]
    response to auxin stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGETHQSEP LPLASGDSDE GISAAIEAEL AELAAGDSSG GGGCGGGGGG IRSKVKGPWS  60
   61 TEEDAVLTKL VRKLGPRNWS LIARGIPGRS GKSCRLRWCN QLDPCLKRKP FSDEEDRMII 120
  121 SAHAVHGNKW AVIAKLLTGR TDNAIKNHWN STLRRKYADL WNNGQWMANS VTTASVKNEN 180
  181 VDETTNPPSS KQQLPQGDIN SSPPKPPQVS DVVMEEAANE PQEPQEQQEQ APPVVSNVPT 240
  241 ENNVFRPVAR VGAFSIYNPT SQKNGYRDYN IVPCEGPLIQ AAKPDSLAGK FLQSLCDEPQ 300
  301 IPSKCGHGCS TLPAETKFSR NSVLGPEFVD YEEPSAVFNQ ELISIATDLN NIAWIKSGLD 360
  361 NAVVREAEQS LKMDNYNYND PRIKFTGMMP RQDFFCARS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] PSI-BLAST 50.154902 c-Myb, DNA-binding domain
    2 View Details [163..399] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle