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Protein Overview: C3H23_ARATH

General Information:
Name(s) found: C3H23_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana GN=At2g25900 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 315 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    Biological Process: regulation of transcription [TAS]
    Molecular Function: DNA binding [IDA]
    transcription factor activity [ISS]
    RNA binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMIGENKNRP HPTIHIPQWD QINDPTATIS SPFSSVNLNS VNDYPHSPSP YLDSFASLFR  60
   61 YLPSNELTND SDSSSGDESS PLTDSFSSDE FRIYEFKIRR CARGRSHDWT ECPFAHPGEK 120
  121 ARRRDPRKFH YSGTACPEFR KGSCRRGDSC EFSHGVFECW LHPSRYRTQP CKDGTSCRRR 180
  181 ICFFAHTTEQ LRVLPCSLDP DLGFFSGLAT SPTSILVSPS FSPPSESPPL SPSTGELIAS 240
  241 MRKMQLNGGG CSWSSPMRSA VRLPFSSSLR PIQAATWPRI REFEIEEAPA MEFVESGKEL 300
  301 RAEMYARLSR ENSLG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] MSA 3.126997 View MSA. No confident structure predictions are available.
    2 View Details [103..190] PSI-BLAST 11.522879 No description for 2d9nA was found.
    3 View Details [191..315] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle