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Protein Overview: SODM2_ARATH

General Information:
Name(s) found: SODM2_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Superoxide dismutase [Mn] 2, mitochondrial OS=Arabidopsis thaliana GN=MSD2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 241 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [ISS]
    endomembrane system [IEA]
    Biological Process: superoxide metabolic process [IEA]
    removal of superoxide radicals [ISS]
    Molecular Function: metal ion binding [IEA]
    superoxide dismutase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTTVIIIIF VAIFATTLHD ARGATMEPCL ESMKTASLPD LPYAYDALEP AISEEIMRLH  60
   61 HQKHHQTYVT QYNKALNSLR SAMADGDHSS VVKLQSLIKF NGGGHVNHAI FWKNLAPVHE 120
  121 GGGKPPHDPL ASAIDAHFGS LEGLIQKMNA EGAAVQGSGW VWFGLDRELK RLVVETTANQ 180
  181 DPLVTKGSHL VPLIGIDVWE HAYYPQYKNA RAEYLKNIWT VINWKYAADV FEKHTRDLDI 240
  241 N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..241] PSI-BLAST 82.522879 Mn superoxide dismutase (MnSOD)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • superoxide dismutase activity
    		•  7.08472506566271 bayes_pls_golite062009
  • oxidoreductase activity, acting on superoxide radicals as acceptor
    		•  7.08472506566271 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.73079314406851 bayes_pls_golite062009
  • protein binding
    		•  1.36581969443298 bayes_pls_golite062009
  • binding
    		•  1.30562201415299 bayes_pls_golite062009
  • antioxidant activity
    		•  0.766723962166325 bayes_pls_golite062009
  • cation binding
    		•  0.485672227923388 bayes_pls_golite062009
  • metal ion binding
    		•  0.485672227923388 bayes_pls_golite062009
  • ion binding
    		•  0.480092270451566 bayes_pls_golite062009
  • catalytic activity
    		•  0.390489225704392 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle