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Protein Overview: MYB46_ARATH

General Information:
Name(s) found: MYB46_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 280 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    response to salicylic acid stimulus [IEP]
    secondary cell wall biogenesis [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKPEVAIAA STHQVKKMKK GLWSPEEDSK LMQYMLSNGQ GCWSDVAKNA GLQRCGKSCR  60
   61 LRWINYLRPD LKRGAFSPQE EDLIIRFHSI LGNRWSQIAA RLPGRTDNEI KNFWNSTIKK 120
  121 RLKKMSDTSN LINNSSSSPN TASDSSSNSA SSLDIKDIIG SFMSLQEQGF VNPSLTHIQT 180
  181 NNPFPTGNMI SHPCNDDFTP YVDGIYGVNA GVQGELYFPP LECEEGDWYN ANINNHLDEL 240
  241 NTNGSGNAPE GMRPVEEFWD LDQLMNTEVP SFYFNFKQSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..136] PSI-BLAST 35.69897 c-Myb, DNA-binding domain
    2 View Details [137..280] FFAS03 0.967 DnaK

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.137874835530144 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle