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Protein Overview: GAE3_ARATH

General Information:
Name(s) found: GAE3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75100157|sp|O81312.1|GAE3_ARATH RecName: Full=UDP-glucuronate 4-epimerase 3; AltName: Full=UDP-glucuronic acid epimerase 3 [NCBI NR]
  • pir||T01339 hypothetical protein F6N15.16 - Arabidopsis thaliana [NCBI NR]
  • gi|7267098|emb|CAB80769.1| putative nucleotide sugar epimerase [Arabidopsis thaliana] [NCBI NR]
  • gi|3193316|gb|AAC19298.1| contains similarity to nucleotide sugar epimerases [Arabidopsis thaliana] [NCBI NR]
  • gi|15236712|ref|NP_191922.1| GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3); UDP-glucuronate 4-epimerase/ catalytic [Arabidopsis thaliana] [NCBI NR]
  • gi|111074442|gb|ABH04594.1| At4g00110 [Arabidopsis thaliana] [NCBI NR]
  • UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1 [Swiss-Prot]
  • (O81312) F6N15.16 protein (Putative nucleotide sugar epimerase) [athaliana3702.FASTAC.txt]
  • putative nucleotide sugar epimerase [Arabidopsis thaliana]gi|7486537|pir||T01339 hypothetical protein F6N15.16 - Arabidopsis thalianagi|3193316|gb|AAC19298.1| contains similarity to nucleotide sugar epimerases [Arabidopsis thaliana]gi|15236712|ref|NP_1 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 NAD-dependent epimerase/dehydratase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: GAE3 | GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3); catalytic | chr4:38702-39994 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At4g00110 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative nucleotide sugar epimerase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3); catalytic [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • contains similarity to nucleotide sugar epimerases [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: GAE3 | UDP-D-glucuronate 4-epimerase 3 | chr4:38702-39994 REVERSE LENGTH=430 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 430 amino acids

    Gene Ontology:
    Cellular Component: membrane [TAS]
    Biological Process: carbohydrate metabolic process [IEA]
    metabolic process [IEA]
    nucleotide-sugar metabolic process [ISS]
    cellular metabolic process [IEA]
    Molecular Function: UDP-glucuronate 4-epimerase activity [ISS]
    catalytic activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQMSHLDDI PSTPGKFKPY FHRTRWQSSV AKLAFWSLVF VGLIFIFFYR SPVSSNPADP  60
   61 SRRSLRTYSW GGPAWEKRVR SSARLRTRRG FSVLVTGAAG FVGTHVSAAL KRRGDGVLGL 120
  121 DNFNDYYDPS LKRARQALLE RSGVFVVEGD INDAALLKKL FEVVPFTHVM HLAAQAGVRY 180
  181 AMENPSSYVH SNIAGFVNLL EVCKSANPQP AIVWASSSSV YGLNTKVPFS EKDRTDQPAS 240
  241 LYAATKKAGE EIAHTYNHIY GLSLTGLRFF TVYGPWGRPD MAYFFFTRDI LKGKAISIFE 300
  301 GVNHGTVARD FTYIDDIVKG CLGALDTAEK STGSGGKKRG AAQLRVFNLG NTSPVPVTDL 360
  361 VTILERLLKV KAKRNIMKLP RNGDVQFTHA NISSAQRELG YKPTTDLQTG LKKFARWYLG 420
  421 YYNGGKKAAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] PSI-BLAST 11.0 No description for 2z5lA was found.
    2 View Details [91..430] PSI-BLAST 83.09691 dTDP-glucose 4,6-dehydratase (RmlB)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • UDP-glucose 4-epimerase activity
    		•  2.13934644118967 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.03956654822048 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.868888700854563 bayes_pls_golite062009
  • binding
    		•  0.835119783772935 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.82673050487418 bayes_pls_golite062009
  • DNA binding
    		•  0.790382977752475 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.613310508772122 bayes_pls_golite062009
  • transcription factor activity
    		•  0.11102650759187 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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