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Protein Overview: gi|42568687, gi|...

General Information:
Name(s) found: gi|9757854 [NCBI NR]
gi|42568687 [NCBI NR]
gi|110743474 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|9757854|dbj|BAB08488.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|42568687|ref|NP_200941.2| rRNA processing protein-related [Arabidopsis thaliana] [NCBI NR]
  • gi|110743474|dbj|BAE99623.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 436 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGSKRSKR ARLDSESEDI SDQENLKAES DNEDDQLPDG IEDDEVDSME DDEGESEEDD  60
   61 EGDTEEDDEG DSEEDDEGEN KEDEDGESED FEDGNDKESE SGDEGNDDNK DAQMEELEKE 120
  121 VKELRSQEQD ILKNLKRDKG EDAVKGQAVK NQKALWDKIL EFRFLLQKAF DRSNRLPQEP 180
  181 VKSLFCSEDE DVSTAYTDLV TSSKKTLDSL LELQEALFEK NPSVDQQVNA TASEESNKSD 240
  241 AEDSDEWQRI SDLQKRMSVF RNKAVDKWQR KTQVTTGAAA IKGKLHAFNQ NVSEQVASYM 300
  301 RDPSRMIKQM QQSRSTVAVF GTVPQEAMEP NPEEKQEEGD PELVEDAEFY RQLLKEFLET 360
  361 IDPASSEAAF YEMKKFQTKK RKVVDRRASK SRKIRYNVHE KIVNFMAPRP AKIPPNTADL 420
  421 LKNLFGLKTR NVQSEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..188] MSA 1.048989 View MSA. No confident structure predictions are available.
    2 View Details [189..350] MSA 1.048987 View MSA. No confident structure predictions are available.
    3 View Details [351..436] Pfam 38.958607 No description for PF08164.3 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle