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Protein Overview: gi|8886993, gi|1...

General Information:
Name(s) found: gi|8886993 [NCBI NR]
gi|25513736 [NCBI NR]
gi|18394951 [NCBI NR]
gi|15028271 [NCBI NR]
Description(s) found:
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  • gi|8886993|gb|AAF80653.1|AC012190_9 Similar to a dnaJ-like protein from Arabidopsis thaliana gb|Y11969. It contains a DnaJ domain PF|00226. EST gb|H37613 comes from this gene [NCBI NR]
  • pir||H86343 T22I11.9 protein - Arabidopsis thaliana [NCBI NR]
  • gi|18394951|ref|NP_564134.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15028271|gb|AAK76724.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9LPU3) T22I11.9 protein (Putative dnaJ protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|25513736|pir||H86343 T22I11.9 protein - Arabidopsis thalianagi|18394951|ref|NP_564134.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]gi|8886993|gb|AAF80653.1| Similar to a dnaJ-lik [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DNAJ heat shock N-terminal domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr1:7378811-7382264 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Similar to a dnaJ-like protein from Arabidopsis thaliana gb|Y11969. It contains a DnaJ domain PF|00226. EST gb|H37613 comes from this gene [nr-271106-contam.fasta]
  • heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr1:7378822-7382275 REVERSE LENGTH=391 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • DNAJ heat shock N-terminal domain-containing protein OS=Arabidopsis thaliana GN=T22I11.9 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4HWD5, DNAJ heat shock N-terminal domain-containing protein OS=Arabidopsis thaliana GN=T22I11.9 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 391 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKETEFYDV LGVSPTATEA EIKKAYYIKA RQVHPDKNPN DPQAAHNFQV LGEAYQVLSD  60
   61 PGQRQAYDTS GKSGISTEII DPAAIFAMLF GSELFEEYIG QLAMASMASL DIFTEGDQID 120
  121 TKKIIEKMRA VQKEREDKLA QILKDRLNLY MTNKDEFTSN AEAEVTRLSN AAYGVEMLNT 180
  181 IGYIYVRQAA KELGKKAIYL GVPFVAEWFR TKGHFIKSQV TAATGAYALF QLQEEMKRQL 240
  241 SAEGNYTEKE LEEYMKTHKK VMIDSLWKLN VADIESTISR VCEQVLQDPT AKREELRARA 300
  301 KGLKTLGKIF QKNKIASESD PLVRAELHKL NGNGQEHDHS STSPKSDEAS RSTVGPQEPQ 360
  361 SPYVEAPKLG EEQINYYFPR PAPPPGAQRH S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] PSI-BLAST 28.522879 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    2 View Details [170..245] deduced N/A No confident structure predictions are available.
    3 View Details [246..391] MSA 5.104987 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • unfolded protein binding
    		•  3.04403163860617 bayes_pls_golite062009
  • heat shock protein binding
    		•  2.17994194200939 bayes_pls_golite062009
  • binding
    		•  2.03854863870179 bayes_pls_golite062009
  • chaperone binding
    		•  1.61155546076854 bayes_pls_golite062009
  • protein binding
    		•  0.912937133925792 bayes_pls_golite062009
  • Hsp70 protein binding
    		•  0.541755903922701 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.423488346839872 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.146399219759372 bayes_pls_golite062009
  • catalytic activity
    		•  0.106988907594358 bayes_pls_golite062009
  • DNA binding
    		•  0.10307408349439 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle