| Protein: | gi|8886993, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 391 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|8886993, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
399.0 | [0..1] | [391..1] |
|
Region A: Residues: [1-169] |
1 11 21 31 41 51
| | | | | |
1 MVKETEFYDV LGVSPTATEA EIKKAYYIKA RQVHPDKNPN DPQAAHNFQV LGEAYQVLSD 60
61 PGQRQAYDTS GKSGISTEII DPAAIFAMLF GSELFEEYIG QLAMASMASL DIFTEGDQID 120
121 TKKIIEKMRA VQKEREDKLA QILKDRLNLY MTNKDEFTSN AEAEVTRLS
|
| Detection Method: |  |
| Confidence: | 28.522879 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| unfolded protein binding | 3.04403163860617 | bayes_pls_golite062009 |
| heat shock protein binding | 2.17994194200939 | bayes_pls_golite062009 |
| binding | 2.03854863870179 | bayes_pls_golite062009 |
| chaperone binding | 1.61155546076854 | bayes_pls_golite062009 |
| protein binding | 0.912937133925792 | bayes_pls_golite062009 |
| Hsp70 protein binding | 0.541755903922701 | bayes_pls_golite062009 |
| nucleic acid binding | 0.423488346839872 | bayes_pls_golite062009 |
| transcription regulator activity | 0.146399219759372 | bayes_pls_golite062009 |
| catalytic activity | 0.106988907594358 | bayes_pls_golite062009 |
| DNA binding | 0.10307408349439 | bayes_pls_golite062009 |
|
Region A: Residues: [170-245] |
1 11 21 31 41 51
| | | | | |
1 NAAYGVEMLN TIGYIYVRQA AKELGKKAIY LGVPFVAEWF RTKGHFIKSQ VTAATGAYAL 60
61 FQLQEEMKRQ LSAEGN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [246-391] |
1 11 21 31 41 51
| | | | | |
1 YTEKELEEYM KTHKKVMIDS LWKLNVADIE STISRVCEQV LQDPTAKREE LRARAKGLKT 60
61 LGKIFQKNKI ASESDPLVRA ELHKLNGNGQ EHDHSSTSPK SDEASRSTVG PQEPQSPYVE 120
121 APKLGEEQIN YYFPRPAPPP GAQRHS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
