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Protein Overview: gi|7435377, gi|7...

General Information:
Name(s) found: gi|7435377 [NCBI NR]
gi|7268772 [NCBI NR]
gi|3250685 [NCBI NR]
gi|15235187 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • pir||T04757 chitinase homolog T16H5.120 - Arabidopsis thaliana [NCBI NR]
  • gi|7268772|emb|CAB78978.1| chitinase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|3250685|emb|CAA19693.1| chitinase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15235187|ref|NP_193711.1| glycosyl hydrolase family 18 protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 365 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: chitinase activity [IEA]
    catalytic activity [IEA]
    cation binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADQTQFLRT NSIVKASYWF PDGKSQSPEC LSQGTPSSFI DSTLFTHLFC AFADVDSSTH  60
   61 EVTISAANSY QFSSFTETVK EKNTDVQTLL SIGGKDADKA VLASMASNSK NRKAFIDSSI 120
  121 DIARKKDFYG LDLAWEYPSN DVEMTNFGKL LEEWRAAVVE ESDKTNQLPL LLTAAVYYSP 180
  181 QYDGVEYPVK AIADNLDFVN IMAYDFYGPG WSPVTGPPAA LFHDPSNPAG RSGNSGLRKW 240
  241 LDEAKLPPKK AVLGFPYCGW AWTLEDAENN GYDAATDGAA ISPDGSITYA KIRNYIVDNG 300
  301 AATFHDPAVI GFYCYVGNTW IGYDDNQSIV YKVKYAKFTG LLGYFSWHVG ADYNCGLSRA 360
  361 GSFSF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..365] PSI-BLAST 102.0 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • imaginal disc growth factor activity
    		•  3.9608908661313 bayes_pls_golite062009
  • growth factor activity
    		•  2.18932950777991 bayes_pls_golite062009
  • chitinase activity
    		•  1.96922204880842 bayes_pls_golite062009
  • receptor binding
    		•  1.89435893935497 bayes_pls_golite062009
  • binding
    		•  1.1885466730171 bayes_pls_golite062009
  • protein binding
    		•  0.690517649847952 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle