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View Structure Prediction Details

Protein: gi|7435377, gi|7...
Organism: Arabidopsis thaliana
Length: 365 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7435377, gi|7....

Description E-value Query
Range
Subject
Range
gi|91079784 - gi|91079784|ref|XP_967813.1| PREDICTED: similar to brain chitinase and chia [Tribolium castaneum]
380.0 [0..15] [364..12]

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Predicted Domain #1
Region A:
Residues: [1-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADQTQFLRT NSIVKASYWF PDGKSQSPEC LSQGTPSSFI DSTLFTHLFC AFADVDSSTH  60
   61 EVTISAANSY QFSSFTETVK EKNTDVQTLL SIGGKDADKA VLASMASNSK NRKAFIDSSI 120
  121 DIARKKDFYG LDLAWEYPSN DVEMTNFGKL LEEWRAAVVE ESDKTNQLPL LLTAAVYYSP 180
  181 QYDGVEYPVK AIADNLDFVN IMAYDFYGPG WSPVTGPPAA LFHDPSNPAG RSGNSGLRKW 240
  241 LDEAKLPPKK AVLGFPYCGW AWTLEDAENN GYDAATDGAA ISPDGSITYA KIRNYIVDNG 300
  301 AATFHDPAVI GFYCYVGNTW IGYDDNQSIV YKVKYAKFTG LLGYFSWHVG ADYNCGLSRA 360
  361 GSFSF

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Detection Method: PSI-BLAST
Confidence: 102.0
Match: 1wawA
Description: Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
imaginal disc growth factor activity 3.9608908661313 bayes_pls_golite062009
growth factor activity 2.18932950777991 bayes_pls_golite062009
chitinase activity 1.96922204880842 bayes_pls_golite062009
receptor binding 1.89435893935497 bayes_pls_golite062009
binding 1.1885466730171 bayes_pls_golite062009
protein binding 0.690517649847952 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle