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Protein Overview: SCRK6_ARATH

General Information:
Name(s) found: SCRK6_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||G96689 probable fructokinase F28G11.11 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|22330456|ref|NP_564875.2| pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12324405|gb|AAG52172.1|AC020665_17 fructokinase, putative; 80047-82040 [Arabidopsis thaliana] [NCBI NR]
  • gi|12322265|gb|AAG51160.1|AC074025_10 fructokinase, putative [Arabidopsis thaliana] [NCBI NR]
  • Probable fructokinase-6, chloroplastic OS=Arabidopsis thaliana GN=At1g66430 PE=2 SV=1 [Swiss-Prot]
  • (Q9C524) Fructokinase, putative [athaliana3702.FASTAC.txt]
  • fructokinase, putative; 80047-82040 [Arabidopsis thaliana]gi|12322265|gb|AAG51160.1| fructokinase, putative [Arabidopsis thaliana]gi|22330456|ref|NP_564875.2| pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana]gi|25287483|pir||G96689 pr [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 PfkB-type carbohydrate kinase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | pfkB-type carbohydrate kinase family protein | chr1:24782063-24784056 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • fructokinase, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • kinase/ ribokinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • fructokinase, putative; 80047-82040 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | pfkB-like carbohydrate kinase family protein | chr1:24778400-24780393 FORWARD LENGTH=384 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Fructokinase OS=Arabidopsis thaliana GN=T27F4.17 PE=3 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 384 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    Biological Process: D-ribose metabolic process [IEA]
    Molecular Function: ribokinase activity [IEA]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQATTTTF CFSGPTFRST PHSLTSKRPI SIKATTSSPS RLSNSRSNLK GRALSSDGST  60
   61 QESPYVVCFG EMLIDFVPTT SGLSLADAPA FKKAPGGAPA NVAVGIARLG GSSAFIGKVG 120
  121 EDEFGYMLAN ILKDNNVNND GMRFDPGART ALAFVTLTNE GEREFMFYRN PSADMLLEES 180
  181 ELDFDLIKKA KIFHYGSISL ITEPCKSAHI SAAKAAKEAG VILSYDPNLR LPLWPSADNA 240
  241 REEILSIWET ADIIKISEEE IVFLTKGEDP YDDNVVRKLF HPKLKLLLVT EGPEGCRYYT 300
  301 KDFSGRVHGL KVDVVDTTGA GDAFVAGILS QLANDLSLLQ DEERLREALM FANACGALTV 360
  361 KVRGAIPALP TKEAVHEALL KAVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..384] PSI-BLAST 60.09691 Crystal structure of aminoimidazole riboside kinase from Salmonella enterica

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribokinase activity
    		•  4.25786236481087 bayes_pls_golite062009
  • 2-dehydro-3-deoxygluconokinase activity
    		•  2.53037762493857 bayes_pls_golite062009
  • catalytic activity
    		•  2.11518580948187 bayes_pls_golite062009
  • carbohydrate kinase activity
    		•  1.99025603598964 bayes_pls_golite062009
  • transferase activity
    		•  1.65599843675995 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.53929419091344 bayes_pls_golite062009
  • kinase activity
    		•  1.44909019943198 bayes_pls_golite062009
  • phosphofructokinase activity
    		•  0.14502182066038 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle