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View Structure Prediction Details

Protein: SCRK6_ARATH
Organism: Arabidopsis thaliana
Length: 384 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCRK6_ARATH.

Description E-value Query
Range
Subject
Range
gi|38604456 - gi|38604456|gb|AAR24912.1| fructokinase 3 [Lycopersicon esculentum]
290.0 [0..1] [383..1]

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Predicted Domain #1
Region A:
Residues: [1-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQATTTTF CFSGPTFRST PHSLTSKRPI SIKATTSSPS RLSNSRSNLK GRALSSDGST  60
   61 QESPYVVCFG EMLIDFVPTT SGLSLADAPA FKKAPGGAPA NVAVGIARLG GSSAFIGKVG 120
  121 EDEFGYMLAN ILKDNNVNND GMRFDPGART ALAFVTLTNE GEREFMFYRN PSADMLLEES 180
  181 ELDFDLIKKA KIFHYGSISL ITEPCKSAHI SAAKAAKEAG VILSYDPNLR LPLWPSADNA 240
  241 REEILSIWET ADIIKISEEE IVFLTKGEDP YDDNVVRKLF HPKLKLLLVT EGPEGCRYYT 300
  301 KDFSGRVHGL KVDVVDTTGA GDAFVAGILS QLANDLSLLQ DEERLREALM FANACGALTV 360
  361 KVRGAIPALP TKEAVHEALL KAVV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.09691
Match: 1tyyA
Description: Crystal structure of aminoimidazole riboside kinase from Salmonella enterica
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ribokinase activity 4.25786236481087 bayes_pls_golite062009
2-dehydro-3-deoxygluconokinase activity 2.53037762493857 bayes_pls_golite062009
catalytic activity 2.11518580948187 bayes_pls_golite062009
carbohydrate kinase activity 1.99025603598964 bayes_pls_golite062009
transferase activity 1.65599843675995 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.53929419091344 bayes_pls_golite062009
kinase activity 1.44909019943198 bayes_pls_golite062009
phosphofructokinase activity 0.14502182066038 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle