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Protein Overview: VIL1_ARATH

General Information:
Name(s) found: VIL1_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • VIN3-like protein 1 OS=Arabidopsis thaliana GN=VIL1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 602 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: chromatin modification [IMP]
    regulation of flower development [IGI]
    histone methylation [IMP]
    vernalization response [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSSTKSKI SHSRKTNKKS NKKHESNGKQ QQQQDVDGGG GCLRSSWICK NASCRANVPK  60
   61 EDSFCKRCSC CVCHNFDENK DPSLWLVCEP EKSDDVEFCG LSCHIECAFR EVKVGVIALG 120
  121 NLMKLDGCFC CYSCGKVSQI LGCWKKQLVA AKEARRRDGL CYRIDLGYRL LNGTSRFSEL 180
  181 HEIVRAAKSM LEDEVGPLDG PTARTDRGIV SRLPVAANVQ ELCTSAIKKA GELSANAGRD 240
  241 LVPAACRFHF EDIAPKQVTL RLIELPSAVE YDVKGYKLWY FKKGEMPEDD LFVDCSRTER 300
  301 RMVISDLEPC TEYTFRVVSY TEAGIFGHSN AMCFTKSVEI LKPVDGKEKR TIDLVGNAQP 360
  361 SDREEKSSIS SRFQIGQLGK YVQLAEAQEE GLLEAFYNVD TEKICEPPEE ELPPRRPHGF 420
  421 DLNVVSVPDL NEEFTPPDSS GGEDNGVPLN SLAEADGGDH DDNCDDAVSN GRRKNNNDCL 480
  481 VISDGSGDDT GFDFLMTRKR KAISDSNDSE NHECDSSSID DTLEKCVKVI RWLEREGHIK 540
  541 TTFRVRFLTW FSMSSTAQEQ SVVSTFVQTL EDDPGSLAGQ LVDAFTDVVS TKRPNNGVMT 600
  601 SH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..239] PSI-BLAST 22.30103 No description for 2nziA was found.
    2 View Details [240..602] PSI-BLAST 26.0 FRAGMENT OF HUMAN FIBRONECTIN ENCOMPASSING TYPE-III REPEATS 7 THROUGH 10


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle