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Protein Overview: gi|7438357, gi|3...

General Information:
Name(s) found: gi|7438357 [NCBI NR]
gi|41619196 [NCBI NR]
gi|3298534 [NCBI NR]
gi|20197429 [NCBI NR]
gi|15225687 [NCBI NR]
gi|111074230 [NCBI NR]
gi|110738559 [NCBI NR]
Description(s) found:
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  • pir||T02545 probable MYB family transcription factor At2g32460 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|41619196|gb|AAS10046.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|3298534|gb|AAC25928.1| putative MYB family transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|20197429|gb|AAM15072.1| putative MYB family transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|15225687|ref|NP_180805.1| MYB101; DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|111074230|gb|ABH04488.1| At2g32460 [Arabidopsis thaliana] [NCBI NR]
  • gi|110738559|dbj|BAF01205.1| putative MYB family transcription factor [Arabidopsis thaliana] [NCBI NR]
  • (O80883) Putative MYB family transcription factor [athaliana3702.FASTAC.txt]
  • putative MYB family transcription factor [Arabidopsis thaliana]gi|3298534|gb|AAC25928.1| putative MYB family transcription factor [Arabidopsis thaliana]gi|15225687|ref|NP_180805.1| myb family transcription factor (MYB101) [Arabidopsis thaliana]gi|41619 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Myb family transcription factor (MYB101) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: MYB101, AtM1, AtMYB101 | AtM1/AtMYB101/MYB101 (myb domain protein 101); DNA binding / transcription factor | chr2:13789496-13791440 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • MYB transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative MYB family transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g32460 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: MYB101, ATMYB101, ATM1 | myb domain protein 101 | chr2:13782419-13784363 REVERSE LENGTH=490 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At2g32460 OS=Arabidopsis thaliana GN=MYB101 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 490 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    gibberellic acid mediated signaling pathway [TAS]
    positive regulation of abscisic acid mediated signaling pathway [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR  60
   61 LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS QLPGRTDNEI KNYWNTRMKR 120
  121 RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS 180
  181 FSSSSSQPSK RLRPDPLVST NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS 240
  241 SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE 300
  301 LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC 360
  361 EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP TMVKVTVDDD DELLTSLLNN 420
  421 FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS 480
  481 CYWSNMPSIC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] PSI-BLAST 41.69897 v-Myb
    2 View Details [129..344] deduced N/A No confident structure predictions are available.
    3 View Details [345..490] MSA 6.148993 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle