| Protein: | gi|7438357, gi|3... |
| Organism: | Arabidopsis thaliana |
| Length: | 490 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7438357, gi|3....
| Description | E-value | Query Range |
Subject Range |
|
|
317.0 | [0..1] | [490..1] |
|
Region A: Residues: [1-128] |
1 11 21 31 41 51
| | | | | |
1 MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR 60
61 LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS QLPGRTDNEI KNYWNTRMKR 120
121 RQRAGLPL
|
| Detection Method: |  |
| Confidence: | 41.69897 |
| Match: | 1h8aC |
| Description: | v-Myb |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [129-344] |
1 11 21 31 41 51
| | | | | |
1 YPHEIQHQGI DIDDEFEFDL TSFQFQNQDL DHNHQNMIQY TNSSNTSSSS SSFSSSSSQP 60
61 SKRLRPDPLV STNPGLNPIP DSSMDFQMFS LYNNSLENDN NQFGFSVPLS SSSSSNEVCN 120
121 PNHILEYISE NSDTRNTNKK DIDAMSYSSL LMGDLEIRSS SFPLGLDNSV LELPSNQRPT 180
181 HSFSSSPIID NGVHLEPPSG NSGLLDALLE ESQALS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [345-490] |
1 11 21 31 41 51
| | | | | |
1 RGGLFKDVRV SSSDLCEVQD KRVKMDFENL LIDHLNSSNH SSLGANPNIH NKYNEPTMVK 60
61 VTVDDDDELL TSLLNNFPST TTPLPDWYRV TEMQNEASYL APPSGILMGN HQGNGRVEPP 120
121 TVPPSSSVDP MASLGSCYWS NMPSIC
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
