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Protein Overview: CHR8_ARATH

General Information:
Name(s) found: CHR8_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Protein CHROMATIN REMODELING 8 OS=Arabidopsis thaliana GN=CHR8 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1187 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA repair [IMP]
    response to gamma radiation [IMP]
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA][ISS]
    DNA binding [IEA][ISS]
    helicase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEDEDQFLL SSLGVTSANP EDLEQKILDE ATKKPDNDEG GSVEEKSTQL EGTNLLSSSQ  60
   61 NELLNKLRAV KFEIDAVAST VENVDEIAAE KGLKKDDESD LQGLHSGSAL QHALATDRLR 120
  121 SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK 180
  181 VVSFREDTDF DAVFDGASAG FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP 240
  241 EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP 300
  301 DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD 360
  361 ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH CQRAGGIIGD EMGLGKTIQV 420
  421 LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA 480
  481 SESDYDSESS VDSDHEPKSK NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG 540
  541 YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP 600
  601 VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV 660
  661 LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR KICNHPDLLE REHSHQNPDY 720
  721 GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK 780
  781 QRMALIDEFN NSEDMFVFVL TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG 840
  841 QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD 900
  901 SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM 960
  961 DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ ASQVAQRAAE ALRQSRMLRS1020
 1021 RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS1080
 1081 AELLNRIRGS REQAIGVGLE QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD1140
 1141 TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..349] PSI-BLAST 5.0 Heavy meromyosin subfragment
    2 View Details [350..989] PSI-BLAST 94.154902 Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54
    3 View Details [990..1187] PSI-BLAST 9.221849 nucleosome recognition module of ISWI ATPase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle