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Protein Overview: gi|20197796, gi|...

General Information:
Name(s) found: gi|20197796 [NCBI NR]
gi|20197611 [NCBI NR]
gi|18397349 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|20197796|gb|AAM15252.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20197611|gb|AAD15431.2| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18397349|ref|NP_565360.1| PHP domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 434 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: DNA replication [IEA][ISS]
    Molecular Function: DNA binding [IEA][ISS]
    DNA-directed DNA polymerase activity [IEA][ISS]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADDKKKRNK KKKRSTGNKR KMTTEQSEAF KSITDWLILG SSPSLSSSSD DFAVNINSGS  60
   61 LRCGEKVVFE LHSHSNRSDG FLSPSKVVER AYNNGVKVLS LTDHDTMAGV PEAVEAGRRF 120
  121 GIKIIPGIEI STLFGLRDSG SEEPVHILAY YGTSGPALYD ELEDFLVKIR DGRFVRGREM 180
  181 VLKLNKLKIP LKWEHVTRIA GKDVAPGRMH VARALLEAGY VENLRQAFTK YLHDGGPAYA 240
  241 TGTEPMAEEA VKLICKTGGV AVLAHPWALK NHVGIIRRLK DAGLHGVEVY RSDGKLEVFS 300
  301 ELADTYNLLK LGGSDYHGKG GRNESELGSV NLPVTALQDF LNVGRPIWCE AIKATMRAFL 360
  361 DQPSDSNLSN ILRFDKARIL KGNSAWSCGK ELMDRCLAIW LTSDERNSND FEALRLKLSF 420
  421 VPIMSNGTCV TVGP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..62] MSA 1.243995 View MSA. No confident structure predictions are available.
    2 View Details [63..434] PSI-BLAST 78.522879 No description for 2hnhA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle