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Protein Overview: YAB1_ARATH

General Information:
Name(s) found: YAB1_ARATH [Swiss-Prot]
Description(s) found:
Found 21 descriptions.
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  • Axial regulator YABBY 1 OS=Arabidopsis thaliana GN=YAB1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 229 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    Biological Process: fruit development [IMP]
    regulation of flower development [IMP]
    cell fate commitment [IMP]
    specification of organ position [IMP]
    polarity specification of adaxial/abaxial axis [ISS]
    meristem structural organization [IMP]
    abaxial cell fate specification [IGI]
    Molecular Function: transcription factor activity [ISS]
    protein binding [IPI]
    transcription regulator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMSSMSSPS SAVCSPDHFS PSDHLCYVQC NFCQTILAVN VPYTSLFKTV TVRCGCCTNL  60
   61 LSVNMRSYVL PASNQLQLQL GPHSYFNPQD ILEELRDAPS NMNMMMMNQH PTMNDIPSFM 120
  121 DLHQQHEIPK APPVNRPPEK RQRVPSAYNR FIKEEIQRIK AGNPDISHRE AFSAAAKNWA 180
  181 HFPHIHFGLV PDNQPVKKTN MPQQEGEDNM VMKEGFYAPA AANVGVTPY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..137] Pfam 48.187087 No description for PF04690.4 was found. No confident structure predictions are available.
    2 View Details [138..229] FFAS03 1.33 Solution structure of the HMG_box domain of thymus high mobility group box protein TOX from mouse


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle