| Protein: | YAB1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 229 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YAB1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
328.0 | [0..6] | [229..1] |
|
|
312.0 | [0..4] | [229..1] |
|
|
295.0 | [0..10] | [229..3] |
|
|
293.0 | [0..11] | [227..11] |
|
|
293.0 | [0..8] | [229..13] |
|
|
274.0 | [0..1] | [229..23] |
|
|
272.0 | [0..21] | [229..3] |
|
Region A: Residues: [1-137] |
1 11 21 31 41 51
| | | | | |
1 MSMSSMSSPS SAVCSPDHFS PSDHLCYVQC NFCQTILAVN VPYTSLFKTV TVRCGCCTNL 60
61 LSVNMRSYVL PASNQLQLQL GPHSYFNPQD ILEELRDAPS NMNMMMMNQH PTMNDIPSFM 120
121 DLHQQHEIPK APPVNRP
|
| Detection Method: |  |
| Confidence: | 48.187087 |
| Match: | PF04690.4 |
| Description: | No description for PF04690.4 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [138-229] |
1 11 21 31 41 51
| | | | | |
1 PEKRQRVPSA YNRFIKEEIQ RIKAGNPDIS HREAFSAAAK NWAHFPHIHF GLVPDNQPVK 60
61 KTNMPQQEGE DNMVMKEGFY APAAANVGVT PY
|
| Detection Method: | |
| Confidence: | 1.33 |
| Match: | 2co9A |
| Description: | Solution structure of the HMG_box domain of thymus high mobility group box protein TOX from mouse |
Matching Structure (courtesy of the PDB): |
|
