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Protein Overview: LECT4_ARATH

General Information:
Name(s) found: LECT4_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Lectin-like protein At1g53080 OS=Arabidopsis thaliana GN=At1g53080 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: plant-type cell wall [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: sugar binding [IEA]
    carbohydrate binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIHKLCIFV LFISLLSSKT ISAVKFNFNR FDGTNLIFIG YAELGPATDG MSRSGALSMT  60
   61 RDNIPFSHGQ GLYTDPIPFK SSNNTSSSVY SFKTSFTFSI TPRRSNPNPG HGIAFIVVPT 120
  121 VAYEYDQDST RGFLGLVNLT TNGNPNNHLF AVEFDVFQDK RFGDINDNHV GVNINSVNSK 180
  181 VSEKAGYWIQ TRTRGKNQWL FKEVKLSSGD NYKAWIEYKN SKVIVWLAPA HLKKPKRPLI 240
  241 ETQVDLSEVV LETMYTGFSG SMGRGVERHD IWSWSFENTA KNN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] PSI-BLAST 61.69897 Phytohemagglutinin-L, PHA-L, also arcelin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  1.55237224251606 bayes_pls_golite062009
  • binding
    		•  1.49960529341364 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.631922887275103 bayes_pls_golite062009
  • DNA binding
    		•  0.343103217108297 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.273381782231095 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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