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Protein Overview: FTSH2_ARATH

General Information:
Name(s) found: FTSH2_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 695 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    thylakoid lumen [IDA]
    membrane [IDA]
    chloroplast envelope [IDA]
    chloroplast thylakoid membrane [IDA]
    thylakoid [IDA]
    Biological Process: oxygen and reactive oxygen species metabolic process [IDA]
    protein catabolic process [IDA]
    thylakoid membrane organization [IMP]
    photoinhibition [IMP]
    PSII associated light-harvesting complex II catabolic process [TAS]
    Molecular Function: ATPase activity [ISS]
    zinc ion binding [ISS]
    ATP-dependent peptidase activity [ISS]
    metallopeptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASSACLVG NGLSVNTTTK QRLSKHFSGR QTSFSSVIRT SKVNVVKASL DGKKKQEGRR  60
   61 DFLKILLGNA GVGLVASGKA NADEQGVSSS RMSYSRFLEY LDKDRVNKVD LYENGTIAIV 120
  121 EAVSPELGNR VERVRVQLPG LSQELLQKLR AKNIDFAAHN AQEDQGSVLF NLIGNLAFPA 180
  181 LLIGGLFLLS RRSGGGMGGP GGPGNPLQFG QSKAKFQMEP NTGVTFDDVA GVDEAKQDFM 240
  241 EVVEFLKKPE RFTAVGAKIP KGVLLIGPPG TGKTLLAKAI AGEAGVPFFS ISGSEFVEMF 300
  301 VGVGASRVRD LFKKAKENAP CIVFVDEIDA VGRQRGTGIG GGNDEREQTL NQLLTEMDGF 360
  361 EGNTGVIVVA ATNRADILDS ALLRPGRFDR QVSVDVPDVK GRTDILKVHA GNKKFDNDVS 420
  421 LEIIAMRTPG FSGADLANLL NEAAILAGRR ARTSISSKEI DDSIDRIVAG MEGTVMTDGK 480
  481 SKSLVAYHEV GHAVCGTLTP GHDAVQKVTL IPRGQARGLT WFIPSDDPTL ISKQQLFARI 540
  541 VGGLGGRAAE EIIFGDSEVT TGAVGDLQQI TGLARQMVTT FGMSDIGPWS LMDSSAQSDV 600
  601 IMRMMARNSM SEKLAEDIDS AVKKLSDSAY EIALSHIKNN REAMDKLVEV LLEKETIGGD 660
  661 EFRAILSEFT EIPPENRVPS STTTTPASAP TPAAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] deduced N/A No confident structure predictions are available.
    2 View Details [81..209] Pfam 17.207608 No description for PF06480.6 was found. No confident structure predictions are available.
    3 View Details [210..695] PSI-BLAST 126.0 EDTA treated

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • hydrolase activity
    		•  2.0744843782316 bayes_pls_golite062009
  • catalytic activity
    		•  1.37148167194523 bayes_pls_golite062009
  • binding
    		•  0.611899617776444 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.0164411291990197 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.0159604738198537 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.00535304039912088 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.40

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle