| Protein: | FTSH2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 695 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FTSH2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
615.0 | [0..58] | [694..1] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MAASSACLVG NGLSVNTTTK QRLSKHFSGR QTSFSSVIRT SKVNVVKASL DGKKKQEGRR 60
61 DFLKILLGNA GVGLVASGKA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [81-209] |
1 11 21 31 41 51
| | | | | |
1 NADEQGVSSS RMSYSRFLEY LDKDRVNKVD LYENGTIAIV EAVSPELGNR VERVRVQLPG 60
61 LSQELLQKLR AKNIDFAAHN AQEDQGSVLF NLIGNLAFPA LLIGGLFLLS RRSGGGMGGP 120
121 GGPGNPLQF
|
| Detection Method: | |
| Confidence: | 17.207608 |
| Match: | PF06480.6 |
| Description: | No description for PF06480.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [210-695] |
1 11 21 31 41 51
| | | | | |
1 GQSKAKFQME PNTGVTFDDV AGVDEAKQDF MEVVEFLKKP ERFTAVGAKI PKGVLLIGPP 60
61 GTGKTLLAKA IAGEAGVPFF SISGSEFVEM FVGVGASRVR DLFKKAKENA PCIVFVDEID 120
121 AVGRQRGTGI GGGNDEREQT LNQLLTEMDG FEGNTGVIVV AATNRADILD SALLRPGRFD 180
181 RQVSVDVPDV KGRTDILKVH AGNKKFDNDV SLEIIAMRTP GFSGADLANL LNEAAILAGR 240
241 RARTSISSKE IDDSIDRIVA GMEGTVMTDG KSKSLVAYHE VGHAVCGTLT PGHDAVQKVT 300
301 LIPRGQARGL TWFIPSDDPT LISKQQLFAR IVGGLGGRAA EEIIFGDSEV TTGAVGDLQQ 360
361 ITGLARQMVT TFGMSDIGPW SLMDSSAQSD VIMRMMARNS MSEKLAEDID SAVKKLSDSA 420
421 YEIALSHIKN NREAMDKLVE VLLEKETIGG DEFRAILSEF TEIPPENRVP SSTTTTPASA 480
481 PTPAAV
|
| Detection Method: | |
| Confidence: | 126.0 |
| Match: | 2ce7A |
| Description: | EDTA treated |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 2.0744843782316 | bayes_pls_golite062009 |
| catalytic activity | 1.37148167194523 | bayes_pls_golite062009 |
| binding | 0.611899617776444 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0164411291990197 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0159604738198537 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.00535304039912088 | bayes_pls_golite062009 |
