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Protein Overview: gi|15242476, gi|...

General Information:
Name(s) found: gi|9758673 [NCBI NR]
gi|15242476 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|9758673|dbj|BAB09212.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|15242476|ref|NP_199382.1| NLI interacting factor (NIF) family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 272 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: phosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKLILKKT TKSISRHQRN YLRRHRKSQI GCSPSPATTT VIATINKSIY RCHRTFLCLF  60
   61 SRHATKGFKI LKPREDFQNS PYSLFHERSG KSFDETKKTI VLDLDETLVH SSMEKPEVPY 120
  121 DFVVNPKIDG QILTFFVIKR PGVDEFLKKI GEKYQIVVFT AGLREYASLV LDKLDPERRV 180
  181 ISRSFYRDAC SEIDGRLVKD LGFVMRDLRR VVIVDDNPNS YALQPENAFP IKPFSDDLED 240
  241 VELKKLGEFL YGDCVKFEDM RVALKEFVGR DE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] deduced N/A No confident structure predictions are available.
    2 View Details [84..272] PSI-BLAST 60.30103 Three-dimensional structure of a RNA-polymerase II binding protein with associated ligand.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrolase activity
    		•  1.47320207089721 bayes_pls_golite062009
  • catalytic activity
    		•  1.01036457072229 bayes_pls_golite062009
  • binding
    		•  0.94971260438956 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.361621573920296 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.290412096949025 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.270489787263307 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.268673530091746 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.138050287397444 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.00945939738917856 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.00340058324101489 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle